FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74690
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2964539.69072164948454No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG40845.4679341277279425No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG38475.150622573302986No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT25923.4703440889007897No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA16312.18369259606373No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG15112.023028517873879No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13461.802115410362833No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11751.5731690989422948No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA10011.3402061855670102No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG7501.004150488686571No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7290.976034275003347No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA6990.9358682554558844No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG5480.7336992904003213No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT5260.7042442093988486No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG5120.685500066943366No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG4000.5355469272995047No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG3450.46190922479582275No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA3260.4364707457490962No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA3210.4297764091578524No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC3110.4163877359753649No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT3060.409693399384121No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC2830.37889945106439954No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACTCCTATGTAATGTC2710.3628330432454144No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG2680.3588164412906681No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2530.3387334315169367No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGTAGCAGAGGCACTTGGTCC2500.3347168295621904No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA2270.3039228812424689No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACCAAGACTCCTATGT2270.3039228812424689No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2170.29053420805998126No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT2150.2878564734234837No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1940.2597402597402597No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1880.25170705583076713No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1780.23831838264827954No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACTTGGTCTCATAGAC1770.23697951533003078No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1740.2329629133752845No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG1740.2329629133752845No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1670.22359084214754318No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1660.22225197482929443No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG1500.20083009773731422No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT1390.18610255723657787No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1370.18342482260008033No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT1360.18208595528183155No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1310.17539161869058775No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1260.16869728209934395No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1260.16869728209934395No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1250.1673584147810952No Hit
CATAGAGGGACGGAGGCAAGAGGATAATGCTCTTTGACTTATGATGGAGT1210.16200294550810015No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGCCATGCTGAAGTCCCATGATC1210.16200294550810015No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1200.1606640781898514No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG1180.15798634355335386No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1180.15798634355335386No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1160.15530860891685633No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1160.15530860891685633No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAAGGCTTG1140.15263087428035882No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGGAGAGGCAAACACATCCTT1110.14861427232561253No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1100.14727540500736377No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1080.14459767037086624No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1070.14325880305261748No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAAGTGCTGCGATTACAAGCA1040.1392422010978712No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1030.13790333377962244No Hit
CATAGACCATCCTCCCACCTTGACCTCACTGTCCTAAAGACAGGCAGGGA1030.13790333377962244No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1020.13656446646137368No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG950.12719239523363235No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA930.12451466059713483No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG890.11915919132413977No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCTCATAGAGAATACA880.11782032400589101No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT880.11782032400589101No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTAGCATTTTAA870.11648145668764225No Hit
CATAGAACATCGCACACACATGGAACATCGCTGACTTCTCTTAAACAGTT850.11380372205114474No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA850.11380372205114474No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG840.11246485473289597No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT830.11112598741464721No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA810.10844825277814968No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA810.10844825277814968No Hit
CATAGAAGGTGATAATCATGACAGCCAAGTCTTTTGCAAGTTTGTCTGCT800.10710938545990091No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACGGGCA800.10710938545990091No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG800.10710938545990091No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGAGACTTGGTCTCATAGAGTTTTG780.1044316508234034No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG770.10309278350515465No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)