FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19284
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA874645.35366106616884No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT5823.0180460485376477No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG4702.4372536818087536No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG3591.8616469612113669No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2531.3119684712715205No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT2501.2964115328769965No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA1800.9334163036714374No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG1640.8504459655673097No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1490.7726612735946898No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG1350.7000622277535781No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1280.6637627048330221No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG1010.5237502592823066No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG970.5030076747562746No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT790.40966604438913085No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACGGTAGCCATTGTCGCCT770.39929475212611487No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC760.39410910599460697No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA750.38892345986309895No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGTGATCATATC740.383737813731591No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA720.37336652146857496No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT690.35780958307405103No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA680.352623936942543No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG680.352623936942543No Hit
CATAGATAGCAGCAATCTCAGGCCTCTGCACCACTGCCCCACATCTCCTC650.3370669985480191No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC640.33188135241651107No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT610.31632441402198713No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGACTATGGCTTAATG590.30595312175897116No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA590.30595312175897116No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC560.2903961833644472No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTGTGCCATACCAAGAATA530.27483924496992324No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT530.27483924496992324No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAAGCGGCACGGTCCCGG520.2696535988384153No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGAACCTGTGTATATTCTC500.2592823065753993No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCACACTGAAACATTTTCTGG500.2592823065753993No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTAGAAGC490.2540966604438913No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA480.24891101431238333No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA470.24372536818087534No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC470.24372536818087534No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT450.23335407591785934No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGAAACATTTTCTGG450.23335407591785934No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT440.22816842978635138No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA440.22816842978635138No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG420.21779713752333543No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT410.21261149139182742No Hit
CATAGAGCCATCATCATTTCTCACCCAGTGCCATACCAAGAATAAGAACT390.20224019912881147No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTGTGAGGTTTCCTGGGC390.20224019912881147No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA380.19705455299730348No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGAAGCTTTGAGATTTGTGTCT370.1918689068657955No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA360.18668326073428748No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGAAGCTTTGAGATTTGTG360.18668326073428748No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA350.18149761460277952No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA330.17112632233976355No Hit
CATAGACGGGAAGAGTAAGACCACCCGGCCAGAAGCTTTGAGATTTGTGT330.17112632233976355No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA300.1555693839452396No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTTCGCGCAGAGCCTTCAGGTCA300.1555693839452396No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT290.1503837378137316No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT290.1503837378137316No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA290.1503837378137316No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA290.1503837378137316No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC280.1451980916822236No Hit
CATAGAACCAACCCTGATTCTGCTGGAGACCCCATATCTACCAAAGATCT280.1451980916822236No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCTCAAACTCGGC280.1451980916822236No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA280.1451980916822236No Hit
CATAGAACAATCAGGCACCCACCATGTCATCAGTGTCAGGAAAGTTGGAA270.14001244555071563No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA260.13482679941920764No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT260.13482679941920764No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA260.13482679941920764No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG250.12964115328769965No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA250.12964115328769965No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA250.12964115328769965No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTTACGTGGTGTTTGG240.12445550715619166No Hit
CATAGACGGGAAGAGTAAGACCACCCCAGAGACAGAACTACCCCTCCTCT240.12445550715619166No Hit
CATAGAACAATCAGGCACCCACCATGTCAGGAAAGTTGGAACCTATCAGT240.12445550715619166No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTATGGCTTAATGTTTCTCTT240.12445550715619166No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA230.11926986102468369No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGGCCATTGTCGCCTTC230.11926986102468369No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG220.11408421489317569No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGACTTGATGCCCAGGAAAGTTGGA220.11408421489317569No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC220.11408421489317569No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA220.11408421489317569No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCACT220.11408421489317569No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA210.10889856876166772No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTAGAGGTTTCCTGGGCAT210.10889856876166772No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG210.10889856876166772No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT210.10889856876166772No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA210.10889856876166772No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCTACATTTATCGGGA200.10371292263015972No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT200.10371292263015972No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGAGGTTTCCTGGGC200.10371292263015972No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGTCTTCAGGTCA200.10371292263015972No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)