FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77173
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1129014.629468855687868No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT37594.870874528656395No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG36784.76591554040921No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA29833.8653415054487965No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT22692.9401474608995377No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA22552.922006401202493No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG13961.808922809790989No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA13941.8063312298342686No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA13851.7946691200290257No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT12861.6663859121713551No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC10871.4085237064776541No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA10741.39167843675897No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9371.2141552097236081No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8851.1467741308488721No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG7741.0029414432508779No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA7731.0016456532725178No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT7690.9964624933590763No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6710.8694750754797663No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6590.8539255957394425No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT6430.8331929560856776No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5990.7761781970378241No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5540.7178676480116103No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC5540.7178676480116103No Hit
CATAGACCATCCCTTCTACAAGAGGCAACACGGAAGACACAGCACACTCT5480.7100929081414484No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC5390.6984307983362057No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA5180.6712192087906392No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT5160.6686276288339187No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT5060.6556697290503155No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4600.5960633900457414No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4570.5921760201106604No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCAGCATTCTCTCAGGGCTGTT4520.5856970702188589No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTGCATTCTCTCAGGGCTGTTC4510.5844012802404986No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC4480.5805139103054178No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA4260.5520065307814909No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGCAACATATCAGAAGCATCT4160.5390486309978878No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT4100.531273891127726No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4040.5234991512575642No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAGGGCAGAGAGTGTGTTGTATT3980.5157244113874023No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT3940.5105412514739611No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGGGAAAGGTATGTGGCACATC3910.5066538815388801No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTCTACGATAGCGAGA3730.4833296619283946No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGGCAACATATCAGAAGCATCT3640.47166755212315187No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT3580.46389281225299006No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3560.46130123229626946No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA3310.42890648283726174No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGTCACTGACAGGTCTTAAAGCT3160.40946963316185714No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT2830.36670856387596695No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTGGGAAAGGTATGTGGCACA2790.36152540396252575No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCACTGAGCTGAGGGTCACTTCTA2770.35893382400580515No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT2720.3524548741140036No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGAGGAGAATGATAT2680.34727171420056235No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT2580.33431381441695934No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2520.3265390745467975No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGAAGTGTATTAA2450.3174685446982753No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2410.3122853847848341No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT2400.31098959480647376No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT2390.3096938048281135No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2350.3045106449146722No Hit
CATAGAACCAACCTCTCTATCTCCGTCACTGACAGGTCTTAAAGCTCTAT2240.2902569551527089No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTAGCACTATTCTCTGGCCCG2180.282482215282547No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACAGGAATCTTTGGGAGGCTATT2180.282482215282547No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGCAACATATCAGA2160.2798906353258264No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCAGACCTTTTTCTGTAGTC2140.27729905536910576No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2060.26693273554222335No Hit
CATAGACACACTGACAATTTGCACCTGGTCACTGACAGGTCTTAAAGCTC2030.26304536560714237No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2030.26304536560714237No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC2000.2591579956720615No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC2000.2591579956720615No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGAGGAGAATGATATTGTTGCA1980.25656641571534083No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAACCTCCCACCCCAGCTGTCTA1890.24490430591009807No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1890.24490430591009807No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCAGGGCAGAG1820.23583377606157593No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC1820.23583377606157593No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1780.23065061614813473No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1750.22676324621305377No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1750.22676324621305377No Hit
CATAGATCCCATACTCCTCCATTACCCTCTCTTTCCCCAGGTAGCAAAAC1690.21898850634289196No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT1680.21769271636453164No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCAGGGCAGAGAGTG1640.21250955645109043No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1640.21250955645109043No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT1620.20991797649436977No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGAGGAGAATGATATTG1550.20084744664584767No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAACTTATCTGGGCA1510.19566428673240643No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT1510.19566428673240643No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1470.19048112681896517No Hit
CATAGACACACTGACAATTTGCACCTGGAAAAACCGCAGACACTCAATGC1440.18659375688388427No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1440.18659375688388427No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATATGGGCTGGGTGATCTATGTG1430.18529796690552394No Hit
CATAGATCCCATACTCCTCCATTACCCTGGTCACTGACAGGTCTTAAAGC1420.18400217692716364No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1370.1775232270353621No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG1320.17104427714356057No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA1310.16974848716520027No Hit
CATAGACACACTGACAATTTGCACCTGTCTTCAGCTCTTTGAGGCATCTA1300.16845269718683994No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC1270.164565327251759No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCACATAGACCTTTTTCTGTAGT1230.1593821673383178No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1220.1580863773599575No Hit
CATAGAAACAGCAAAGCCCTCCACCAGAGACTTGGTCTCATAGAGGAGAA1210.15679058738159718No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG1100.1425368976196338No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG1080.1399453176629132No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT1070.13864952768455288No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGGGGAAAAGGGATA1050.13605794772783228No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1040.13476215774947195No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1030.13346636777111168No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1030.13346636777111168No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGTCACTGACAGGTCTTAA1030.13346636777111168No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGAGGAGAATGATATTGTTGCA1030.13346636777111168No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT1020.13217057779275135No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA1010.13087478781439105No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1000.12957899783603075No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA930.12050846798750858No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCTGGGAGTGTGTGCAGGATTC930.12050846798750858No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCCAGGTAGCAAAACAGAGTCT920.11921267800914827No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA900.11662109805242765No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA840.10884635818226582No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA830.1075505682039055No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA810.10495898824718489No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT790.10236740829046428No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA790.10236740829046428No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTAGATCGGTAAGGAATCTTTGG780.10107161831210397No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGC780.10107161831210397No Hit
CATAGACCCCCTTGAGTTCACTGGACCCTTGAGGTCACTGACAGGTCTTA780.10107161831210397No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)