FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808037

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808037
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136735
Sequences flagged as poor quality0
Sequence length150
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4204030.745602808351926No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG71845.2539583866603286No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG59284.335393278970271No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT52773.859289867261491No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG44633.263977767213954No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT20951.5321607488938458No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA20381.4904742750575932No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT19691.4400117014663398No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT18651.3639521702563353No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT16771.2264599407613268No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG16201.184773466925074No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT16011.1708779756463232No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT11670.8534757011738033No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG11060.8088638607525506No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTTGCTCTTT10770.7876549530112992No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG10290.752550553991297No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA9190.6721029729037921No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC8240.6026255165100376No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG7740.5660584341975354No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC7660.560207701027535No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA7440.5441181848100339No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACATGCCT7220.528028668592533No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG7110.5199839104837825No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACACTCTTGGTCTTTG6680.4885362196950306No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT6620.4841481698175302No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC6160.45050645409002815No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA6140.44904377079752805No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT5740.4197901049475262No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG5650.4132080301312758No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTAGGGATAGTTTGAGG5590.4088199802537756No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGAGGCACTTGGTCCA5310.3883424141587743No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA5200.3802976560500238No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG4980.36420813983252276No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG4880.3568947233700223No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAGTGTTAAAGTGGGGAAAGGA4410.32252166599627013No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA4240.3100888580100194No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC4090.2991187333162687No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCAGACACTCTTGGTC4010.2932680001462683No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCATTTTAACACAGCA3980.2910739752075182No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG3660.2676710425275167No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA3520.2574322594800161No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA3500.255969576187516No Hit
CATAGAAGGTGATAATCATGACAGCCAACTTGGTCTCATAGAAGGTGATA3310.2420740849087651No Hit
CATAGACATGAGTGGCCGAACAGACCTCAGGTTAACAAAGCTCTGTCTTC3260.2384173766775149No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG3140.22964127692251435No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTTCGCTGACTT3060.223790543752514No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2830.2069696858887629No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2780.2033129776575127No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2730.19965626942626247No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGGAGGCAAAGGAGGCATGAG2690.1967309028412623No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2570.18795480308626175No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG2560.1872234614400117No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2440.17844736168501116No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT2400.17552199510001099No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2340.1711339452225107No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2280.16674589534501041No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG2210.1616265038212601No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG2160.15796979559000987No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT2080.1521190624200095No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2000.14626832925000915No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT1990.1455369876037591No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1920.14041759608000878No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1890.13822357114125866No Hit
CATAGAAGCAGCATTGATCATCCTCCAATTCAGGGGGCTTCTTAGAGTTT1870.13676088784875853No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTC1840.1345668629100084No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT1820.1331041796175083No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCAACAAAGCAAACA1750.127984788093758No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1740.12725344644750797No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGGTGGGATTACAGATA1720.12579076315500787No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1720.12579076315500787No Hit
CATAGAGATGTCAAGAGCAATGCCCAGTACAGGAGCACCCAGTACAGGAG1660.12140271327750758No Hit
CATAGAGGGACGGAGGCAAGAGGATACACTGACACTCTTGGTCTTTGTGG1640.11994002998500748No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1600.11701466340000731No Hit
CATAGACCATCCTCCCACCTTGACCTCCACAAAGTGCTGGGATTACAGGA1580.11555198010750722No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1570.11482063846125717No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTATAGGCA1570.11482063846125717No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1540.11262661352250704No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1510.1104325885837569No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCCTCCCAGCCAGCCAAGCCAG1500.10970124693750687No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1470.10750722199875673No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGAACCCAGGAG1440.10531319706000657No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAAAGCCTTCAGGTCA1440.10531319706000657No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAAGTGCTAGGATTACAAGTG1390.10165648882875634No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTTGACAAAGCAAAGG1380.10092514718250631No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)