FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808039

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808039
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96741
Sequences flagged as poor quality0
Sequence length150
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3307334.1871595290518No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG46144.769435916519367No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG40594.195739138524514No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT29123.0100991306684857No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA24972.5811186570326954No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT24862.5697480902616263No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG22432.318561933409826No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA16971.7541683464094853No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT16641.7200566460962776No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATAGGGATAGTTTGAGGGTAA14641.5133190684404751No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT12061.2466275932644897No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG10901.1267197982241244No Hit
CATAGAGAATACAATGAACTGTGATGGCATACGGTAGCAGAGGCACTTGG10241.0584963975977093No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT8680.8972410870261833No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG8580.8869042081433931No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG7040.7277162733484251No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG6200.6408864907329881No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA5730.5923031599838744No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT4890.5054733773684374No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4660.48169855593802No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG4560.4713616770552299No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT4470.46205848606071886No Hit
CATAGACCATCTGCGCATCCTGTCTGCTGTTTGTCTTCCATGCTTCTATG4300.44448579195997556No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG4150.4289804736357904No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4140.4279467857475114No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG4070.4207109705295583No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA4000.41347515531160517No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG3430.35455494567970147No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT3360.34731913046174834No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA3200.33078012424928416No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTC3200.33078012424928416No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGAAGGCTTGTGAGGGCTGA2930.3028705512657508No Hit
CATAGAGCCTGGCATTTGAGGTAAGGTACGGTAGCAGAGGCACTTGGTCC2920.3018368633774718No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG2810.29046629660640266No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2710.28012941772361255No Hit
CATAGAGGGACGGAGGCAAGAGGATAGAGGGACGGAGGCACTTGGTCCAG2540.2625567236228693No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2490.25738828418147425No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2450.2532535326283582No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCGATAAACAAAAAC2230.23051239908621993No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTTGAGGCACTTGGTCCAGA2060.21293970498547668No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2040.21087232920891866No Hit
CATAGAACATCGCACACACATGGAACAGTCTATGTGTAGAACCATGTCGT1970.20363651399096555No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1920.1984680745495705No Hit
CATAGAGAATACAATGAACTGTGATGGCACACATGCCTAGCCATTTTTGG1910.1974343866612915No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1880.19433332299645445No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT1880.19433332299645445No Hit
CATAGAGATGTCAAGAGCAATGCCCAGTACAGGAGCACCCTCTATGTGTA1800.18606381989022233No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1780.1839964441136643No Hit
CATAGAAGCAGCATTGATCATCCTCCAAGTACGGTAGCATTTTAACACAG1670.17262587734259519No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1570.16228899845980505No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAACTCCTA1550.16022162268324702No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG1480.15298580746529392No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1470.15195211957701493No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1440.14885105591217787No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTTTGACT1350.13954786491766677No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1340.13851417702938773No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1330.13748048914110875No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGTCTATGTGTAGAACCATGT1320.1364468012528297No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1300.13437942547627169No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1300.13437942547627169No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1300.13437942547627169No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT1280.13231204969971366No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1250.12921098603487663No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1240.12817729814659762No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTACTCCTAT1220.1261099223700396No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1220.1261099223700396No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGACACTCTTGGTCTTTGTGGATCTA1200.12404254659348156No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1190.12300885870520255No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1190.12300885870520255No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAAGGATTGCCCCACAT1170.12094148292864453No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1160.11990779504036551No Hit
CATAGACCATCCTCCCACCTTGACCTCTATGTGTAGAACACTGTCGTCAG1160.11990779504036551No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1140.11784041926380748No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGTCTTTT1140.11784041926380748No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1130.11680673137552848No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT1110.11473935559897044No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAAGTGCTGCGATTACAAGCA1110.11473935559897044No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTGACACTCTTGGTCTTTGTGG1080.11163829193413341No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1060.10957091615757539No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1050.10853722826929636No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1030.10646985249273834No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1030.10646985249273834No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGTTTGTCTTCCATGCTTCTA1010.10440247671618032No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGGCA1000.10336878882790129No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA990.1023351009396223No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA980.10130141305134327No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCT970.10026772516306427No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)