FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154150
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA149229.680181641258514No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA103616.721375283814466No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG83295.403178722024003No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG67614.3859876743431725No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG58023.7638663639312355No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG52783.423937722997081No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG46503.016542328900422No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC46192.9964320467077523No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA31622.051248783652287No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT30081.9513460914693481No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT28471.8469023678235486No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT26981.7502432695426533No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT23781.5426532598118716No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA21781.412909503730133No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT18961.2299708076548814No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA17411.1294193966915342No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC15721.019785922802465No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG14850.963347388906909No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT14830.9620499513460915No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT14710.9542653259811872No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT13710.8893934479403179No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT13480.8744729159909179No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG13310.8634446967239702No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG10270.6662341874797275No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC9330.6052546221213104No Hit
CATAGAGCAGCTTGAATTCTCCTCAGATGCCTGGCCAACTGTTTTTTCTA8550.5546545572494324No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCCCGTTCTCTCTGTTGTGTCTATGT8400.544923775543302No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG8150.5287058060330847No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT7720.5008108984755109No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT7270.4716185533571197No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCTGAGAAAAGATGCAGTACAGCT6830.4430749270191372No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCGAAGAGGGCCAATTGCTTGA6760.4385338955562763No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT6720.4359390204346416No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG6700.4346415828738242No Hit
CATAGAGGCTGCAGTGAACAATGATCGACACTGACGCCATGCTGAAGTCC6700.4346415828738242No Hit
CATAGACCCTCTCTTACCCTTCCACCATTAGCCCGTTCTCTCTGTTGTGT6600.4281543950697373No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGGCCATGCTGAAGTCCCATG6440.41777489458319816No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG6030.3911774245864418No Hit
CATAGACCCTCTCTTACCCTTCCACCAAGCCCGTTCTCTCTGTTGTGTCT6010.3898799870256244No Hit
CATAGATGGCAAATGGTGGGATCTCTGAGACCATGGGCTGGTGTTTTCCT5900.3827440804411288No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCAGTCTTCAGCCCACCCATGCC5800.3762568926370418No Hit
CATAGACCCCATGACTCAGCTCCTCATGATGGGAGTGTCTGCTGGTCTAT5130.3327927343496594No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCAACATGCTTTTAG5020.3256568277651638No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT5010.3250081089847551No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTTGATGTTCGCACCCAAGCTC5010.3250081089847551No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCGGTGGGTTGAGGGAGT4970.3224132338631204No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGAATGATGGGAGTGTC4950.32111579630230297No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTATGTGCTCGTATCTTGGCCATCT4740.30749270191372036No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT4690.304249108011677No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT4610.2990593577684074No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGGCCATGC4390.28478754459941613No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTTGATGTTCGCACCCAAGCTCT3990.2588387933830684No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACGAATGAGGAAACAGGC3890.2523516055789815No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3890.2523516055789815No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGGCCATGCTGAAGTCCCATGA3880.25170288679857283No Hit
CATAGATGGCAAATGGTGGGATCTCTATGATGATGGGAGTGTCTGCTGGT3870.2510541680181641No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGGTAAAGGCTGGGGTCTT3830.24845929289652935No Hit
CATAGACCAGTACGCCTTACCCCTTGATGCCTGGCCAACTGTTTTTTCTA3820.24781057411612067No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA3540.22964644826467726No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG3510.2277002919234512No Hit
CATAGACCCCATGACTCAGCTCCTCATTCTAAAAAAGAACGATGAAATAC3440.22315926046059031No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGACCAACATGCTTTTAGTCACG3300.21407719753486865No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA3300.21407719753486865No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC3230.2095361660720078No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC3180.20629257216996433No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGCATCTATGAGCCATGCTGAAGTCC3080.1998053843658774No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3050.1978592280246513No Hit
CATAGATTCAGAGAAGGACAGCGTGGCTGGGTCCTAAATGTCTTTGTCCT3030.19656179046383393No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT2970.19266947778138177No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2870.18618228997729483No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGACGAATGAGGAAACA2840.18423613363606875No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT2710.17580278949075576No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGAAGCCATGCTGAAGT2690.17450535192993838No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG2670.17320791436912097No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGTGGGTTGAGGGAGTCTTCTC2610.16931560168666884No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCAGCCATGCTGAAGTCC2590.16801816412585144No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA2510.1628284138825819No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTCCTTTCAATAGCCTTTTAGG2510.1628284138825819No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGTCATTGTGGGTTTTAACTACT2470.16023353876094712No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT2460.15958481998053844No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC2450.15893610120012974No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT2420.15698994485890366No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGACCACCCTGGGAGAAGAAAT2380.1543950697372689No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2350.15244891339604283No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGCACATAGATGCCTGGCCAAC2340.15180019461563413No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCAGGCCCTTCAGCATC2270.14725916315277326No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGTGGGTTGAGGGAGTCTTCTCTAT2240.14531300681154719No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT2230.14466428803113848No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCCTGGGAGAAGAAATGTTGGT2190.14206941290950373No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG2070.1342847875445994No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGTCAGACCCAGGCTACACA2020.13104119364255595No Hit
CATAGAGGTGAGCGGCTGTCTCCAACACAGACCATGGAGAGAATAATCCG1990.12909503730132987No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCTGTCCTGGCCATGCTGAAGTCCC1970.1277975997405125No Hit
CATAGATTCCTCCAAAGACTGCAGGGTGGGTTGAGGGAGTCTTCTCTATG1960.1271488809601038No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAAGTCGTAAAGGCTGGG1920.12455400583846901No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCACACTACCAACATGCTT1890.12260784949724293No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA1880.12195913071683426No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT1870.12131041193642557No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTATGTGCTCGTATCTTGGCCA1800.11676938047356471No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATCCAAACCATATCATACCCCA1780.11547194291274732No Hit
CATAGAACATTGATTCCTGGCATGTCCCATTGTAGATTTCTTTCACCTCC1730.11222834901070387No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTTACCTCTCAGTTA1720.11157963023029516No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGTGTTGTCTTTATGGTGTCCTCA1710.11093091144988648No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)