FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54195
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1499227.663068548759114No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC35126.480302610941968No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA20383.7604945105637047No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT17843.2918165882461485No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT16913.1202140418857827No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA16703.08146507980441No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA15312.824983854599133No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG15112.7880800811883018No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT10892.009410462219762No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA8631.592397822677369No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT8371.5444229172432882No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA7351.3562136728480487No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA6691.2344312205923056No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA6051.1163391456776455No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT5010.924439523941323No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATGGTTCTACACAAAGTCACGA4830.8912261278715747No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC4770.8801549958483255No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT4650.8580127318018268No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4370.806347449026663No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC4240.7823599963096226No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT3910.7214687701817512No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA3200.5904603745733001No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG3160.5830796198911339No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT2950.5443306578097611No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2650.48897499769351416No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC2490.4594519789648492No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2410.44469046960051667No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2380.4391549035888919No Hit
CATAGAAACCCCAAAGGCTATGTTCAGAACCATCACAAAGTCACGAAAGT2360.43546452624780885No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC2080.38379924347264505No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACCATTTTCCCCCAAGTCATCT1990.367192545437771No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA1930.35612141341452164No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1830.337669526709106No Hit
CATAGACCTTTGGGTTCATATCATCTGGTACGGTTGCACAGATCATTTAA1770.32659839468585666No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1710.3155272626626072No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1610.29707537595719163No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC1420.2620167912169019No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1350.249100470523111No Hit
CATAGACCTTTGGGTTCATATCATCTGGTCATAGACAAGCAATGGGGAAA1300.23987452717040314No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1280.23618414982932004No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCTTTCCCTCACTCTCTCCATC1200.22142264046498752No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1190.21957745179444596No Hit
CATAGATCCCATCCAATAATAATGAGCATCCTTTCCCTCACTCTCTCCAT1150.21219669711227976No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGACGACATGGTTCTACA1110.2048159424301135No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1100.2029707537595719No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1060.19558999907740565No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC940.1734477350309069No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT910.16791216901928221No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA900.16606698034874065No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA880.16237660300765755No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA840.1549958483254913No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA810.1494602823138666No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG790.14576990497278347No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA750.1383891502906172No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG750.1383891502906172No Hit
CATAGATGTCCATCATGTGGAAGCTGGGTGTAGTGGCATGCACCTGTAAT740.13654396162007565No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCAATGGGCAA740.13654396162007565No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT690.12731801826736783No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA660.12178245225574315No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA660.12178245225574315No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA650.11993726358520157No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC630.11624688624411847No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG630.11624688624411847No Hit
CATAGATCATGGGACTTCAGCATGGCAAACATGTCAAAACCCAATCTCTA590.10886613156195221No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA570.10517575422086908No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG550.10148537687978595No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)