FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214509
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC111685.206308360022191No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA96284.488389764532024No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA88304.116377401414393No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC82293.8362026768107635No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA72993.402654434079689No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA65543.055349658988667No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT61052.846034432121729No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA57732.6912623712757973No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA50842.3700637269298728No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG40221.8749796045853553No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT32121.4973730705937747No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT31281.4582138744761293No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC29241.3631129696189903No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA28601.3332773916245937No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT26161.2195292505209572No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA25791.2022805569929467No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA25771.2013481951806217No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC24631.1482035718781032No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA24161.126293069288468No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT22791.062426285144213No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT21701.0116125663725064No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA21120.9845740738150847No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA20000.9323618123248908No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT18520.8633670382128488No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT16550.7715293996988472No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT15960.7440247262352628No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC14320.6675710576246218No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT14120.6582474395013729No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG14100.657315077689048No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA12910.601839549855717No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC12820.5976439217002549No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA12210.5692068864243459No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT11610.5412360320545991No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG11400.5314462330251878No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11050.5151299013095021No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC10930.5095357304355529No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT10790.5030091977492785No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT10560.49228703690754233No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA10510.48995613237673014No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT10130.4722412579425572No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT9740.45406020260222185No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA9470.4414733181358358No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT9120.4251569864201502No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA8820.4111715592352769No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC8270.38553160939634235No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG8240.384133066677855No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG8150.379937438522393No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG8120.37853889580390565No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG8100.3776065339915808No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC7900.36828291586833184No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC7750.36129020227589514No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA7670.3575607550265956No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA7510.35010186052799647No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG7410.345440051466372No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA7260.33844733787393533No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA7180.3347178906246358No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT7110.3314546242814987No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATGAGGTTCTTCAACACAGCT7110.3314546242814987No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCAAGGTTTTCCGGCTT7070.3295899006568489No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG6810.3174691970966253No Hit
CATAGACCCCCATGCAACCACATCTATGAGACCACAATGGGCACACTTAA6390.2978895990378026No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT6260.2918292472576908No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTACACATAGAAGGGCAAGTGT6160.2871674381960663No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT5840.2722496491988681No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATTGGTGAAAAGTAGGGGACAGT5790.2699187446680559No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTATACCACAGCCCAGTTTTCC5720.26665547832491876No Hit
CATAGACCCACTTACACACACAGGTTTCCAACTCTATAGATTATGCTCTC5650.26339221198178164No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA5630.2624598501694568No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA5540.25826422201399474No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5530.2577980411078323No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATCACTTGATCATCCATTGTC5370.2503391466092332No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGCCCCTTTACCTACCTTC5350.2494067847969083No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA5250.24474497573528384No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG5230.24381261392295894No Hit
CATAGACCCCCATGCAACCACATCTATAGACCCCCTTTACCTACCTTCTC5120.23868462395517204No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGACACTGACGACAAGGTTTT5000.2330904530812227No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT4990.23262427217506024No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4920.22936100583192315No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4900.22842864401959825No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA4870.22703010130111093No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4820.2246991967702987No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG4820.2246991967702987No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG4790.22330065405181135No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG4770.22236829223948648No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4580.21351085502239997No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAACAAGGGCATGGTCA4520.21071376958542534No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTCAGTCACTCAAATATAGAC4420.20605196052380087No Hit
CATAGATTTGGCACTCACATACACGCTCTGGGAGGAACAGGGAGATGTTC4410.20558577961763844No Hit
CATAGAATTCCCCAATGTCCTGTGCATAGACTTTTGCCAAGATTGTAGGA4380.20418723689915105No Hit
CATAGACAGTATGGGGGAAACGGCTCGTCAGTGTCCACAGCCCAGTTTTC4170.19439743786973973No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4110.19160035243276508No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC4080.19020180971427772No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT4020.18740472427730304No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG3930.18320909612184105No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT3830.17854728706021658No Hit
CATAGACAGAACACCACACCCCTGTCTCTTAGGAGTTCTGGCCCCTGTCT3780.17621638252940436No Hit
CATAGACAGAACACCACACCCCTGTCTATCTTAGGAGTTCTGGCCCCTGT3770.17575020162324193No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGTGGTGCTGGAACTAGTTCTATGAG3710.17295311618626724No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAGAACAAGGGCATG3590.1673589453123179No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3420.15943386990755634No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGTGTCCTGGCAAAAGGGTAAGAG3380.15756914628290652No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA3340.15570442265825676No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC3310.15430587993976944No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3300.153839699033607No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTATGATCTAGCTTCGGAAT3250.15150879450279475No Hit
CATAGAATTCCCCAATGTCCTGTGCAAAAGGGCAAGTGTATGGTCAGTTC3210.14964407087814496No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC3170.1477793472534952No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT3160.14731316634733274No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAACACTGACGACAAGGTTTTC3020.1407866336610585No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCGAACAAGGGCATGGTCAAGTGTCT2980.13892191003640872No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACAAGCACATTATTATTGGT2940.13705718641175896No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAAACCAAACAATAGCC2880.13426010097478427No Hit
CATAGATTGCCTCATTGTGCCAGACACTGACGACAAGGTTTTCCGGCTTG2840.13239537735013449No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2830.13192919644397205No Hit
CATAGATCTGCTCACCTAAATTTCGTTCACACTGACGACAAGGTTTTCCG2790.13006447281932226No Hit
CATAGAATTCCCCAATGTCCTGTACAAACCAAACAATAGCCAGTCTATGA2770.12913211100699737No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCTACCGTACCTGGGCCCATAATA2730.1272673873823476No Hit
CATAGAAAAGTCACCATGCAGCCCTGCTCACATAGAACAAGGGCATGGTC2660.12400412103921046No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTGCCCTGTGATTGTCCTGGTCTA2640.12307175922688558No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTCTCTGGTGAAA2520.11747758835293624No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGAGACCTGGGCCCATAATAC2480.11561286472828647No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCGTAATCCCTCCCTTTTC2460.11468050291596157No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT2330.10862015113584979No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2230.10395834207422533No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT2190.10209361844957553No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGTCGTCAGTCCACAGCCCAGTT2160.10069507573108821No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)