FastQCFastQC Report
Tue 7 May 2024
EGAF00005808052

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808052
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32085
Total Bases4.8 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1068533.302166121240454No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG9032.81439925198691No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA8362.6055789309646253No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA7142.22533894343151No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG5821.8139317438055167No Hit
CATAGAGGTCGCAGCTACCCAGAAAGGCCGTCCCTGAGCACTCCATTCAA5541.7266635499454575No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC5361.6705625681782763No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTGACGACATGGTTCTA5281.6456287985039737No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA5231.6300451924575348No Hit
CATAGATCACCTACACAGACAGCTTTCCACACTGACGACATGGTTCTACA3811.187470780738663No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCAAAATTCCTTTATCCTGG3391.056568489948574No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC3371.0503350475299984No Hit
CATAGAACACAGATCTGCTTGGAGGTAGCATAGAGTAACCTCCTCCAGTC3331.0378681626928472No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG3331.0378681626928472No Hit
CATAGATCATGCAAAGAACACAGGCCTTTGACTCAATAGTTTGAATTGTG2910.9069658719027583No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG2750.857098332554153No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC2660.8290478416705626No Hit
CATAGACCCTTCTCCATGCCACATCATCTATGAGACCAAGTCTCTGCAGC2640.8228143992519868No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA2160.6732117812061711No Hit
CATAGATGTGCCTCTCCAACATTCATATGTTGAAACCTAGTCACCAAGGT2150.6700950599968833No Hit
CATAGACCCTTCTCCATGCCACATCAAGAGTCTCGCTAATAGTTTTTCCA2010.6264609630668536No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGACACTGACGACATGGTTCT1790.5578930964625214No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA1790.5578930964625214No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1720.5360760479975066No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC1660.5173757207417796No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCTACACA1570.48932522985818916No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGCATGTTG1410.43945769050958394No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT1300.4051737572074178No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC1300.4051737572074178No Hit
CATAGATCACCCAGGTAATCACTAGGTACACTGACGACATGATTCACCAA1230.38335670874240296No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGAGTCTCGCTAATAGTTTT1160.3615396602773882No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1140.3553062178588125No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1060.3303724481845099No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTCTATGAGACCAAGTCTCTGC1050.3272557269752221No Hit
CATAGACCCTTCTCCATGCCACATCATCTAGCATGTTGAGATGAATAATT1040.32413900576593424No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAGGACAGAT1010.31478884213807073No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA970.30232195730091943No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG960.29920523609163163No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGTCTCTGCTACCGT930.2898550724637681No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA920.2867383512544803No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT910.2836216300451925No Hit
CATAGACTCAAGCAATCCTCCCACCTCAACCTGTCCTCCCACCTCAACCT910.2836216300451925No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC860.2680380239987533No Hit
CATAGACCATTTGCCGCGTTCTGAAGCTCATTAATAGACCTCCTCAGGCC760.236870811905875No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA760.236870811905875No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT750.23375409069658717No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC750.23375409069658717No Hit
CATAGAAGATCCCATAGCAGCTTTGCCTAATAGTTTTTCCAAATATAAGA750.23375409069658717No Hit
CATAGATGTGCCTCTCCAACATTCATTACGGTAGCATGTTGAGATGAATA740.23063736948729938No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT740.23063736948729938No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG720.22440392706872372No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG700.21817048465014804No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGTCCTGG680.2119370422315724No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACTGACGACATGGTTCTACACAT670.20882032102228454No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC660.2057035998129967No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA640.19947015739442106No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA630.19635343618513326No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT620.1932367149758454No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCTGAGTAGCCTGGGACT590.18388655134798193No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT580.1807698301386941No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG570.17765310892940625No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA570.17765310892940625No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCGGTGGTTTACACCTGTAAT560.17453638772011842No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG550.1714196665108306No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA530.16518622409225495No Hit
CATAGATCACCTACACAGACAGCTTTCCTCTTGAAGGATGCTGCATCTTT530.16518622409225495No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTGACGCCATGGGTCCT520.16206950288296712No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA500.15583606046439144No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG490.15271933925510361No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT490.15271933925510361No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCACTGGCTCACGCCTGTAAT480.14960261804581582No Hit
CATAGAAGGAGGGGAAACTGAGGCCAATAGTGCAGCTATATTGGAGGAAA480.14960261804581582No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT480.14960261804581582No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG480.14960261804581582No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG440.13713573320866448No Hit
CATAGATCACCCAGGTAATCACTAGGTGCACTGACGACATGGTTCTACAC410.127785569580801No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG390.12155212716222534No Hit
CATAGACTCAAGCAATCCTCCCACCTTGGCTTCCCAAAGTGCTGGGATTG390.12155212716222534No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGGAGGGAAGGA380.1184354059529375No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG380.1184354059529375No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG370.11531868474364969No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGCGATGGTTTATGCCTGTAAT370.11531868474364969No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG370.11531868474364969No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA360.11220196353436186No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAATGGGAGGGAAGGAAGGG360.11220196353436186No Hit
CATAGAAGATGGTCTGCTACACTGGTGGTTCCACACTCATGCAAAGCTGG360.11220196353436186No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCAAGA360.11220196353436186No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTGACGGAGTGAGGGCAGTAA350.10908524232507402No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC330.10285179990649836No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT330.10285179990649836No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)