FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63773
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2773343.487055650510406No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG32435.085224154422718No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA13352.093362394743857No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG12832.011823185360576No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG11081.737412384551456No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT11051.7327081993947284No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT9741.5272921142176157No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA6381.0004233766641055No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5890.9235883524375519No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA5400.8467533282109984No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG5180.8122559703949946No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG4740.7432612547629874No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4210.6601539836607969No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG4020.630360811001521No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTAGAGGCACTTGGTCCAG3560.5582299719316952No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTACAGGCA3520.5519577250560582No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGATGGGTTTTTGCCAGA3360.5268687375535102No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGAGGCACTTGGTCCAG3050.47825882426732313No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCAGAGGCACTTGGTC2820.44219340473241026No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT2780.43592115785677327No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCCACCCAGCCAAAGCCAGCCA2650.4155363555109529No Hit
CATAGAGATGTCAAGAGCAATGCCCACCACACTGACACTCTTGGTCTTTG2600.4076960469164066No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGAGGCACTTGGTCCAGACTTTC2490.3904473680084048No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC2480.3888793062894956No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG2360.3700625656625845No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCATTTTAACACAGCATTGAAGT2320.36379031878694745No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC2090.3277248992520345No Hit
CATAGAGAATACAATGAACTGTGATGGCAAGTCTAGCATTTTAACACAGC2060.3230207140953068No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2060.3230207140953068No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1890.2963636648738494No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG1870.2932275414360309No Hit
CATAGAGCCTGGCATTTGAGGTAAGGTACGGTAGCATTTTAACACAGCAT1750.27441080080911984No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1720.26970661565239207No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1590.24932181330657174No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1560.24461762814984395No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTGGCTGAGACCACAGACA1540.24148150471202545No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1490.23364119611747916No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1470.23050507267966067No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1420.22266476408511438No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGACGAATCAAGTACGCC1310.20541608517711257No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCAACAAAGCAAACA1300.2038480234582033No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTAGGGATAGTT1290.20227996173929405No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG1290.20227996173929405No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1240.1944396531447478No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1230.19287159142583854No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1230.19287159142583854No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1200.18816740626911077No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1170.183463221112383No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1140.17875903595565523No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1140.17875903595565523No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTGCTCTTTGACTTATGATGG1120.1756229125178367No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1110.17405485079892746No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1070.16778260392329042No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1060.16621454220438117No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1040.16307841876656265No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1040.16307841876656265No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTGTGCATG1030.1615103570476534No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGTCCTTTCCCCATCTCCAAC1020.15994229532874416No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1020.15994229532874416No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA980.1536700484531071No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC960.15053392501528862No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA930.14582973985856085No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG920.14426167813965157No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA880.13798943126401456No Hit
CATAGAGTTTTGTTCCCTTGCTGGCACCCCACATTTTGTGCCCCTGGTAG870.1364213695451053No Hit
CATAGAGAATACAATGAACTGTGATGGCAGCCACCCCATCCTACATGTGT860.13485330782619603No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG850.1332852461072868No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA840.13171718438837754No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA840.13171718438837754No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA790.12387687579383125No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCAGTACAGGAGCACCCTC780.12230881407492197No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTTAAAGTGG770.12074075235601273No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTAGCATCACACCCAGCTA770.12074075235601273No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG710.11133238204255719No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT690.10819625860473868No Hit
CATAGACCATCTGCGCATCCTGTCTGCCTTTCCCCATCTCCAACCCTCTA680.10662819688582942No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG670.10506013516692017No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)