FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170150
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT157449.25301204819277No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG85175.005583308845137No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG66823.927123126652953No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA61113.5915368792242135No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG59053.47046723479283No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT48232.834557743167793No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG45732.6876285630326184No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA44702.6270937408169264No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG44332.60534822215692No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC43902.5800764031736705No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC43042.52953276520717No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC32911.9341757272994415No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA31881.8736409050837497No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT28881.6973258889215397No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT28161.6550102850426094No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG22311.3111960035263004No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG19521.1472230384954452No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA19371.1384072876873348No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC17521.0296796943873052No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT14170.832794593006171No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT13660.8028210402585954No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT12090.7105495151337056No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT11970.7034969144872172No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC10760.6323831913017925No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG10060.5912430208639435No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT9770.5741992359682633No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG9770.5741992359682633No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT9180.5395239494563621No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG9140.5371730825741992No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT8290.4872171613282398No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG8200.48192771084337355No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT7710.45312959153687926No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG7500.44078754040552454No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT7260.42668233911254777No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG7240.4255069056714664No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT6640.3902439024390244No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT6630.3896561857184837No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGACGAATGAGGAAACAGGC6570.3861298853952395No Hit
CATAGAAGTCTCGCTCTGTCATGCAACAACAACAAAACTCGTGACTTCTA6440.3784895680282104No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT6420.37731413458712904No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6410.3767264178665883No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC6260.3679106670584778No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGTCATTGTGGGTTTTAACT6210.3649720834557743No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACACTGACCAACATGCTTTTAGTC6130.3602703496914487No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACCAACATGCTTTTAGTC5920.34792829856009405No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT5620.33029679694387304No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCATGTATGATGGGAGTGTCTGC5420.31854246253305907No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG5040.29620922715251247No Hit
CATAGAAGGAACAGCAGAGAGGGCAGCCCGTTCTCTCTGTTGTGTCTATG4720.2774022920952101No Hit
CATAGACCAGTACGCCTTACCCCTTGCACTGTCATTGTGGGTTTTAACTA4590.26976197472818103No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG4590.26976197472818103No Hit
CATAGAACATTGATTCCTGGCATGTCCTTCCTTTCAATAGCCTTTTAGGT4560.26799882456655894No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC4520.26564795768439614No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG4400.2585953570379077No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT4370.2568322068762856No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAGCCCGTTCTCTCTGTTGTGT4290.25213047311196No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT4230.24860417278871585No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACGAATGAGGAAACAGGCACT4040.23743755509844253No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC4030.23684983837790186No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGGGGTCCTAAATGTCT4020.23626212165736116No Hit
CATAGATCTAGCCCATCACTTCAGCATCATAACTGGCTTGATTGCACCTT4010.23567440493682043No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG3920.23038495445195417No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCATTAGGAAGTCTTCT3890.22862180429033208No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCAACATGCTTTTAGT3730.2192183367616809No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC3550.20863943579194827No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3480.20452541874816338No Hit
CATAGATCTCCTCTCTGTAATGCACCAGACACTGTCAGACCCAGGCTACA3480.20452541874816338No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC3440.20217455186600058No Hit
CATAGACCCCATGACTCAGCTCCTCAACACTGACGAATGAGGAAACAGGC3400.19982368498383782No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTACAAAAATTGGGA3300.1939465177784308No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTACAAAAATTGGGA3290.1933588010578901No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACAACAACAAAACTCG3240.1904202174551866No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT3230.1898325007346459No Hit
CATAGATCTAGCCCATCACTTCAGCACGAATGAGGAAACAGGCACTCTAT3200.1880693505730238No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG3180.1868939171319424No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT3170.1863062004114017No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTATGTTACAAAAATTGGGAA3110.1827799000881575No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTGGGCTGGTGTTTTCCTTGA3080.1810167499265354No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG2970.17455186600058772No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCTATGTGT2960.17396414928004703No Hit
CATAGATGGCAAATGGTGGGATCTCTTGCCTGGGTCCTAAATGTCTTTGT2940.17278871583896563No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTACACTGACCAACATGCTTTTAG2900.1704378489568028No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2890.16985013223626214No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT2880.16926241551572144No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTAGTAAAGGCTGG2850.1674992653540993No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACACTGTCATTGTGGGTTTTAAC2830.16632383191301794No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2790.16397296503085512No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC2690.15809579782544814No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG2680.15750808110490744No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCAACATGCTTTTAG2620.15398178078166325No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGTGCTCGTATCTTGGCCAT2570.15104319717895973No Hit
CATAGAATCTGGTTCAAGCACACAGTGTGACTGTTAATATAGAAGAGACA2550.14986776373787833No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGACCATGGAGAGAAT2480.14575374669409347No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACTGGCTTGATTGCAC2430.14281516309138995No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGGCTGGTGTTTTCCTTGATC2340.13752571260652366No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA2320.13635027916544226No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT2260.13282397884219807No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2220.13047311196003525No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGTGCTGGAATAGTTGGACTC2190.12870996179841315No Hit
CATAGAGGCTGCAGTGAACAATGATCGACACTGTCATTGTGGGTTTTAAC2150.12635909491625036No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2140.12577137819570966No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTGGTGGGTT2080.12224507787246548No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAAGTCTAACAACAACAAAACT2070.12165736115192477No Hit
CATAGAGCTAATAAAGACATACCTGAGCCACATGCCTGGCCAACTGTTTT2020.11871877754922126No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAGACTGTTAATATAGAAGAGA2020.11871877754922126No Hit
CATAGACCAGTACGCCTTACCCCTTGGTACGGTAGCAGGCCCTTCAGCAT1980.11636791066705848No Hit
CATAGAACATTGATTCCTGGCATGTCCACACTGTCATTGTGGGTTTTAAC1950.11460476050543639No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGTCATTGTGGGTTTTAACT1930.11342932706435499No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACTGTCATTGTGGGTTTTAACT1910.11225389362327358No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA1910.11225389362327358No Hit
CATAGATGGCAAATGGTGGGATCTCTGTACGGTAGCAGGCCCTTCAGCAT1900.1116661769027329No Hit
CATAGAAGTATTCACACTGGGGCCCAGTGACCCTGGGAGAAGAAATGTTG1800.1057890096973259No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG1800.1057890096973259No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGACTGTTAATATAGAA1760.10343814281516309No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGGTGGGTTGAGGGAGT1760.10343814281516309No Hit
CATAGAACATTGATTCCTGGCATGTCCCCATTGTAGATTTCTTTCACCTC1760.10343814281516309No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)