FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences193274
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG104145.388205345778532No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA93814.853730972608835No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA92694.795782153833418No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG85964.447571841013277No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG70363.6404275794985357No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA69783.6104183697755516No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG63623.291699866510757No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT48442.506286412036798No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT45292.3433053592309365No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA33171.7162163560540993No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA33011.707937953371897No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG31831.6468847335906538No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC31111.6096319215207426No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA31021.6049753200120038No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT30281.566687707606817No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA24721.2790132144002815No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG24011.242277802498008No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA20481.059635543321916No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC19941.0316959342694827No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA18100.9364943034241543No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA17590.9101068948746339No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC16360.8464666742552024No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC15520.8030050601736396No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT15090.7807568529652203No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT15070.7797220526299451No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT14720.7616130467626272No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT12750.6596852137380093No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA12720.6581330132350962No Hit
CATAGACCTGTGTGTGAGGCATTGTTATAGAACAGCTAAAAATCTTGGAG12610.652441611391082No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA11930.6172583999917216No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGTGCAAATTGTCAGTGTGTCTA11580.5991493941244037No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA10060.5205045686434803No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG9980.516365367302379No Hit
CATAGAAGGAGCTGGACTGGATGGACTCTCAGTTGTGTGTGTGGTCTATG9850.5096391651230895No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT9770.5054999637819882No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT9770.5054999637819882No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT9710.5023955627761623No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT9570.4951519604292352No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA9020.46669495120916415No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA9010.4661775510415266No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT7820.40460693109264567No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGAGGCACAGGGTAATGGAGGA7540.39011972639879133No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA7530.3896023262311537No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGAGACCAAAGCTAG7200.37252812069911106No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG7110.3678715191903722No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC6870.35545391516706853No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT6810.3523495141612426No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6650.3440711114790401No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA6530.33786230946738827No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG6510.33682750913211296No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCTGAGATTGGCCTGTGT6450.333723108126287No Hit
CATAGATGTGCCACATACCTTTCCCATCTCCCTCATTATCCCTGTGCCTC6410.3316535074557364No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA6360.3290665066175481No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA6310.3264795057793599No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTTAGCAACCTGTA6210.32130550410298336No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT6150.3182011030971574No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAACTTAGCAACCTGTAC6040.3125097012531432No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTAATGGAGGAGTATGG5920.30630089924149134No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAACTTAGCAACCTGTACAT5820.3011268975651148No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG5750.29750509639165124No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT5750.29750509639165124No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCACATAGAACAGCTAAAAATCTT5560.2876744932065358No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG5420.28043089085960865No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG5260.27215248817740617No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT5240.27111768784213086No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC5030.26025228432174013No Hit
CATAGATGTGCCACATACCTTTCCCATAGAGAACAGCTAAAAATCTTGGA5030.26025228432174013No Hit
CATAGACGGGCCAGAGAATAGTGCTAGTACGTAGGACACTTTGGACTCTG5020.25973488415410245No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACATGTGTGAGAGGGAAGGAC4960.2566304831482766No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACTGACGACATGTGTGAGAGG4800.24835208046607407No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGAACATTAGCTTAGTTAATT4780.24731728013079873No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT4780.24731728013079873No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA4680.24214327845442224No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG4530.23438227593985742No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG4490.2323126752693068No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG4490.2323126752693068No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGGCAAACTAACACAGAAA4470.23127787493403149No Hit
CATAGAATACAACACACTCTCTGCCCTGTAGAACAGCTAAAAATCTTGGA4450.23024307459875615No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT4220.2183428707430901No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC4130.21368626923435122No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGCTACCGTAAGACCAAAGCTA4080.21109926839616294No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGTGTGAGAG4050.20954706789325No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA4010.20747746722269939No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACTACACATAGAACAGCTAA3930.20333826588159817No Hit
CATAGACTCTGTTTTGCTACCTGGGGGAGAGGAGGGGGCAGAATATCTAT3780.19557726336703335No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGGCACAGGGTAATGGAGGAGTAT3730.19299026252884507No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTGGTGGAGGGCTTT3690.19092066185829445No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT3660.1893684613553815No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCAGAACATTAGCTTAGT3490.18057265850554136No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3480.1800552583379037No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT3360.17384645632625184No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG3320.17177685565570122No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTGGAGGGCT3310.1712594554880636No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGGTCATTCTTCTCT3170.16401585314113643No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC3080.15935925163239753No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACAGTGAAACAA2930.1515982491178327No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2810.14538944710618085No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAGATGCTCAGATCTCAAAA2800.14487204693854322No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCACAACTGGCATCTGGTGATC2790.14435464677090554No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT2570.13297184308287716No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGTGGTGGAGGGCTTTGCTGT2560.1324544429152395No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAACAGTGAAACAAGATCGT2560.1324544429152395No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2540.1314196425799642No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT2520.13038484224468888No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGGAGAGGAGGGGGCAGAATATC2520.13038484224468888No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT2500.1293500419094136No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2500.1293500419094136No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC2480.1283152415741383No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2450.12676304107122532No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCCTTGGAGAGAAATGCTGCTCTA2410.1246934404006747No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACCGTGGCTGAGAAAGGAGG2310.11951943872429815No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGGGAGAGGAGGGGGCAGAAT2290.11848463838902284No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2290.11848463838902284No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGTCTCTGCTACCGTACA2270.11744983805374754No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACTGACGACATGTGTGAGAGGG2230.1153802373831969No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC2220.11486283721555926No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA2170.11227583637737099No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA2120.10968883553918271No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2120.10968883553918271No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2070.10710183470099444No Hit
CATAGAAGGAGCTGGACTGGATGGACCAGGCTGAGAAAGGAGGATCACTC2060.1065844345333568No Hit
CATAGATGTGCCACATACCTTTCCCAGTTCTTTTTCTATGAGACCAAAGC2040.10554963419808147No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2030.10503223403044383No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT2030.10503223403044383No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)