FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568168
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC452137.957681530814829No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC383576.750996184227201No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG306155.388371045183819No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCAATCTGTGAGTTGCTGATGC185783.269807521718928No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA174383.069162642035454No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA171283.014601315103983No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA152662.686881344954309No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA138032.429387082693851No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC111991.9710719364694949No Hit
CATAGACAGGGAGGCGTATAAGTGATGGTTCTACTCAGGAGGCTGAGGCA107611.893982061643739No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT105771.8615972740457047No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT98571.7348741921403528No Hit
CATAGATCATGGGACTTCAGCATGGCCTCATAGACCACCTGATTGGCCAT94491.6630644457273203No Hit
CATAGATGTATACAAGCTGTCACAGACAACACACTGACTGATACAGGAAG92591.629623632446741No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGGCAAGCAATGACAGTCTATGA92121.6213514312668085No Hit
CATAGAGAGATTTTGGGCTGAGACGAACACTGACTGATACAGGAAGGCCT84991.4958603793244252No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA84711.4909322594725505No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG80921.4242266371918164No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG66401.1686684220160235No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT62911.1072429281480125No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG60711.0685219864547104No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT53250.937222793258332No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT52410.9224384337027077No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCACAAAGTCACGAAAGTGGGTCTA52360.9215584123005872No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC40620.7149293870826938No Hit
CATAGATGCCCTTTTTGTGTACTTCCACAAAGTCACGAAAGTGGGTCTAT40170.7070091944636094No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACTGATACAGGAAGGCC39770.6999690232466453No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT35150.6186550456907112No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA34840.6131989129975641No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA34820.612846904436716No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGATACAGGAAGGCCTTTCTA34520.6075667760239929No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGGAATTTTGTACCATGTTTTCAT33870.5961264977964265No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT33770.5943664549921854No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGACTGATACAGGAAG32450.5711338899762043No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACGACCTGATTGGCCATTT30770.5415651708649555No Hit
CAAAGTCACGAAAGTGGGTCTATGAGACCAAGTCTCTGCTACCGTATCGA29430.5179805972881261No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT29410.5176285887272779No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACCTGATTGGCCATTT28020.4931639937483279No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG26540.46711536024556116No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTAGCAGAATTACCTCTGGA26090.45919516762647666No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTGGCTTGACTTTTCATCTAT24600.43297052984328577No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTAGCAGAATTACCTCTGGA24420.429802452795652No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTGGAGACAGCCGCTCACCTCT22440.3949536052716802No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGTGTATACGTGAATGTGGATC22330.3930175581870151No Hit
CATAGACAGGGAGGCGTATAAGTGATGTATACGTGAATGTGGATCAGAAC22110.3891454640176849No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACCATGTTTTCATCCTGCTTCT21770.3831613184832655No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC20140.3544726207741372No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCAATGGGGAAAGGATTCTATGAG20140.3544726207741372No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC19520.343560355387843No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG18450.3247278973824643No Hit
CATAGACAGAAACCACCCAGACAACCTGATTGGCCATTTGAACTCTATGA18280.32173582461525463No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACACATAGAGATGTTTGACAAGC18130.31909576040889315No Hit
CCTGATTGGCCATTTGAACTCTATGAGACCAAGTCTCTGCTACCGTATCG18100.31856774756762085No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA17770.31275960631362554No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT16340.28759099421297923No Hit
CATAGAGCTGGCTTCCTAACTTCCAAAGCTGCCTTCCTAACCATGGGCAT15180.26717449768378365No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCAATACCTGATTGGCCATTTGA14940.2629503949536053No Hit
CATAGATCATGGGACTTCAGCATGGCGGTCTCATAGAATCCTTTCCCTCA14000.24640599259373985No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTAACCTGATTGGCCATTT13890.2444699455090748No Hit
CATAGATGAAAGCCTGTTGAATTTATGACAAGTCTCTGCTACCGTAACCT13370.23531772292702158No Hit
CATAGATCATGGGACTTCAGCATGGCCTTGGTCTCATAGAAAGGCCTTCC13280.23373368440320466No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC12980.22845355599048167No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCACAAGCAATGGGGAAAGGATTCT12150.21384520071528137No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGATCCCCAGAAATGT12150.21384520071528137No Hit
CATAGATTGGAACTTTGCCAGCCTTTCCCTCACTCTCTCCATCTATGAGA12150.21384520071528137No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTTACGGTAGCAGAATTACCTCTG11470.2018769096464426No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA11240.19782881119668833No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACCATTTTCCCCCAAG11010.193780712746934No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATGTGTGCTTCTTTCAA10950.19272468706438942No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACACAAAGTCACGAAAG10890.1916686613818448No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT10860.1911406485405725No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT10670.1877965672125146No Hit
CATAGATGTCCATCATGTGGAAGCTGCTTCCTTCTGCTGGCTATTCTATG10300.1812844088368229No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT10200.17952436603258193No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG10040.1767082975457963No Hit
CATAGATCATGGGACTTCAGCATGGCTATTCTATGAGACCAAGTCTCTGC9920.1745962461807071No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCTCTGCTACCGTACACAAAGT9250.16280395939229242No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA9050.15928387378381043No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACAAGCAATGGGGAAA9020.15875586094253813No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACGGTAGCAGAATTACCTCTGG8730.15365173681023922No Hit
CATAGACAGGGAGGCGTATAAGTGATGATGGTTCTACACATACTCAGGAG8720.15347573252981514No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAGCAGAATTACCTCTGGA8490.14942763408006082No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA8470.14907562551921263No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAAGCAATGGGGAAAGGATTC8330.14661156559327523No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAAGCAGAATTACCTCTGG8140.14326748426521735No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA8010.14097942861970403No Hit
CATAGAGGATCCCATCTGAGTTGGTCTACGGTAGCAGAATTACCTCTGGA7990.1406274200588558No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTATCCCCAGAAATGTTAGC7700.13552329592655693No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTATCCCCAGAAATGTTAGCATGT7670.13499528308528463No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7610.13393925740274004No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCTACACATAGAACTTCACAAGCA7590.13358724884189183No Hit
CATAGATGCCCTTTTTGTGTACTTCCACGACATGGTTCTACACATAGATG7590.13358724884189183No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACCAAGTCTCT7540.13270722743977134No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT7530.13253122315934723No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGATCTATCCAGGAAT7410.13041917179425802No Hit
CATAGACAGAAACCACCCAGACAACCCATGACTGATACAGGAAGGCCTTT7180.12637107334450376No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA7160.12601906478365554No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGCTTCCT6830.12021092352966023No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAAATGACCTTCTCTTCTGTC6670.11739485504287464No Hit
CATAGATCATGGGACTTCAGCATGGCTATTGCTGAAGTGCTTCCTTCTGC6390.11246673519099985No Hit
CATAGATCATGGGACTTCAGCATGGCGACAGCCGCTCACCTCTATGAGAC6360.11193872234972754No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC6310.11105870094760704No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT6020.10595457681530816No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGGAGACAGCCGCTCACCTCTAT6010.10577857253488405No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA5870.10331451260894664No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACTATCCCCAGAAATGTTAGC5850.10296250404809844No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT5810.10225848692640206No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG5780.10173047408512975No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)