FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568168
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA439757.739788231649794No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA370006.512158375691697No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG297475.235599329775701No Hit
CATAGATGCATCAGCAACTCACAGATTGACTTCGTCTCAGCCCAAAATCT175133.0823629630672618No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA173523.0540262739189816No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT166952.938391461680348No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA151572.6676968783880826No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT134522.367609580264992No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGAACCATCACTTATACGCCTCCCT107251.8876459075484717No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAACTCAGATGGGATC105561.8579011841567987No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT103231.8168921868179835No Hit
CATAGACTGTCATTGCTTGCCCATTGGAAGTTAGGAAGCCAGCTCTATGT91551.611319187282635No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGTCTATGAGGCCATGCTGAAGTC89071.5676701257374577No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA88151.5514777319384407No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGTTGTCTGTGACAGCTTGT85441.5037805719435096No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT80901.4238746286309683No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG78771.386385716900635No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTCGTCTCAGCCCAAAATCT78121.3749454386730686No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT65741.1570521395080329No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTATGCAAGACTAGGCAATTT61041.0743301277087058No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG56150.988264034581321No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT51500.9064220441841144No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT51150.9002618943692711No Hit
CATAGACCCACTTTCGTGACTTTGTGAACTTTGCCCCAAAAGAGGTTCTA50890.8956857830782445No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG40540.7135213528393011No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC39980.7036651131355515No Hit
CATAGACCCACTTTCGTGACTTTGTGGAAGTACACAAAAAGGGCATCTAT39860.7015530617704623No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCCAAACTGGACAATGAGAG36980.6508638290083215No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG34130.600702609087453No Hit
CATAGAAGCAGGATGAAAACATGGTACAAAATTCCTGGAAGTACACAAAA33160.5836301938863153No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATAAATTCAACAGGCTTT33020.581166133960378No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT32690.5753579927063825No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATAAATTCAACAGGCTTTCATCTA32270.5679658129285704No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA31840.5603976288703341No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCAACCCCTTAAGAAAATTT31360.5519494234099773No Hit
CATAGAGTTCAAATGGCCAATCAGGTCGTCAGTGTAAGGCTGGCAAAGTT29510.5193886315315189No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAT29060.5114684389124343No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT28420.500204164965292No Hit
CATAGAGTTCAAATGGCCAATCAGGTACACTGACGCCATGCTGAAGTCCC26610.46834739020852983No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAGCCATGCTGAAGTCCCA24620.433322538404134No Hit
CATAGATGCATCAGCAACTCACAGATTGCATAGCCATGCTGAAGTCCCAT24460.43050646991734837No Hit
CATAGATGAAAAGTCAAGCCAGCACATCACTTATACGCCTCCCTGTCTAT24160.42522634150462535No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACCCTAAAGCCCTTGTGA23160.40762591346221544No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGAACATAGCCTTTGGGGTTTCT21700.3819292885202968No Hit
CATAGAAGTTCTGATCCACATTCACGTATACACATAGACCAACTCAGATG21660.3812252713986004No Hit
CATAGAAGTTCTGATCCACATTCACGTATACATCACTTATACGCCTCCCT21580.37981723715520765No Hit
CATAGAAGCAGGATGAAAACATGGTACATCACTTATACGCCTCCCTGTCT21160.37242505737739545No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA20720.36468086903873503No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGAACCATGTCGTCAGTGTAGA20080.3534165950915926No Hit
CATAGAATCCTTTCCCCATTGCTTGGAAGTTAGGAAGCCAGCTCTATGTG19490.3430323425465707No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTTCCACATGATGGACATCTATGTG17970.31627969192210753No Hit
CATAGAGTTCAAATGGCCAATCAGGTTGTCTGGGTGGTTTCTGTCTATGT17760.31258360203320146No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT17600.30976753354641584No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA17540.30871150786387125No Hit
CATAGAATCCTTTCCCCATTGCTTGTCAAACATCTCTATGTGTACCCTAA17230.30325537517072415No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT15860.2791427887526225No Hit
CATAGAGTTCAAATGGCCAATCAGGTATTGAGCAGGAATTAGACTCTTGA14400.25344616381070384No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTTGGAAGTTAGGAAGCCAG13780.24253389842440967No Hit
CATAGAGTTCAAATGGCCAATCAGGTTACGGGAGCAGGAATTAGACTCTT13440.23654975288999028No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG13390.2356697314878698No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCGCCATGCTGAA13160.2316216330381155No Hit
CATAGACATGCTAACATTTCTGGGGATCTAACATTACTGGGGACTGTGAC12940.22774953886878527No Hit
CATAGAGTTCAAATGGCCAATCAGGTTACGGTAGCAGAGACTTGTCATAA12850.22616550034496838No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAACTGGGGACTGTGACTC12550.2208853719322454No Hit
CATAGAGGCGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA11950.2103251151067994No Hit
CATAGATGGAGAGAGTGAGGGAAAGGCTGGCAAAGTTCCAATCTATGTGT11900.2094450937046789No Hit
CATAGAATCCTTTCCCCATTGCTTGTGAACTTTGCCCCAAAAGAGGTTCT11860.2087410765829825No Hit
CATAGATATGCCCATGGTTAGGAAGGCCTTTCTATGAGACCAAGGCCATG11300.19888483687923292No Hit
CATAGACCAGACTTTTGAAAGAAGCACACATACGGGAGCAGGAATTAGAC11150.1962447726728714No Hit
CATAGACCCACTTTCGTGACTTTGTGTACGGGAGCAGGAATTAGACTCTT10580.18621252868869773No Hit
CATAGATGACTTGGGGGAAAATGGTACACTGACGCCATGCTGAAGTCCCA10550.1856845158474254No Hit
CATAGAGGCGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA10200.17952436603258193No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTTCCACATGATGGACATCTATG10180.1791723574717337No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT10140.1784683403500373No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGCCATGCTGAAGTCCCATG9930.1747722504611312No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG9860.17354022049816253No Hit
CATAGATTGCATAGCCATGCTGAAGTCCCATGATCTATGTGTAGAACCAT9430.16597203643992622No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACTGGGGACTGTGACTCT9230.16245195083144423No Hit
CATAGACCCACTTTCGTGACTTTGTGTACGGTAGCAGAGACTTCGTCTCA8740.15382774109066333No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATCATCACTTATA8740.15382774109066333No Hit
CATAGAATCCTTTCCCCATTGCTTGTACACTGACGCCATGCTGAAGTCCC8720.15347573252981514No Hit
CATAGATATGCCCATGGTTAGGAAGGCTGGCAAAGTTCCAATCTATGTGT8130.14309147998479324No Hit
CATAGAATCCTTTCCCCATTGCTTGTGACAGCTTCCACATGATGGACATC8100.14256346714352094No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTATGAGACCAACTCAGATGGGA7840.13798735585249433No Hit
CATAGACCATCCAGAGGTAATTCTGCTTCTATGAGACCAACTCAGATGGG7820.13763534729164612No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA7780.1369313301699497No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA7770.13675532588952563No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAGACCAACTCAGATGGGA7750.13640331732867744No Hit
CATAGAATAGCCATGCTGAAGTCCCATGATCTATGTGTAGAACCATGTCG7570.13323524028104364No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATAGAGCAGGAATTAGACTCTT7470.13147519747680264No Hit
CATAGACCCCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG7420.13059517607468213No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCAGTGTCAACCCCTTAAGA7260.12777910758789654No Hit
CATAGAACGGCCTTCCTGTATCAGTCAGTGTGTTGTCTGTGACAGCTTGT7210.12689908618577603No Hit
CATAGAATCCTTTCCCCATTGCTTGTGAAGTTCTATGTGTAGAGACCAAC7160.12601906478365554No Hit
CATAGACATGCTAACATTTCTGGGGATACGGAGCAGGAATTAGACTCTTG7130.12549105194238325No Hit
CATAGAGGTGAGCGGCTGTCTCCACTGGGGACTGTGACTCTGTTTTCTAT6720.11827487644499514No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATGGGTTGTCTGGGTGGTTTCTGT6600.11616282507990595No Hit
CATAGAATAGCCAGCTTCCACATGATGGACATCTATGTGTAGAACCATGT6480.11405077371481674No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGTCGTCAGTGTATGCAAGACTAG6370.11211472663015165No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTATGAGACCAACTCAGATGGG6220.10947466242379016No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAGCAGGAATTAGACTCTTGACA6140.10806662818039735No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGCAATTTACAAATCTATGTGTAG6020.10595457681530816No Hit
CATAGACATGCTAACATTTCTGGGGATAGTGACTGGGGACTGTGACTCTG5970.10507455541318765No Hit
CATAGAACGGCCTTCCTGTATCAGTCAGTGTTCGTCTCAGCCCAAAATCT5870.10331451260894664No Hit
CATAGATGCATCAGCAACTCACAGCTTGACTTCGTCTCAGCCCAAAATCT5800.10208248264597795No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)