FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81241
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2321228.57178025873635No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA42835.271968587289669No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG36964.549427013453798No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG27143.3406777366108247No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG24312.9923314582538376No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG23112.844622788985857No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT16592.04207235262983No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG13191.6235644563705516No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA11761.4475449588262084No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG11691.4389286197855762No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC11681.4376977142083431No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT10211.256754594355067No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG9301.1447421868268486No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT8421.0364224960303294No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT8110.9982644231361013No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT6970.8579411873315198No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT6440.7927031917381618No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT5530.6806907842099432No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA5290.6511490503563472No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA5150.6339163722750828No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT4950.6092982607304194No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG3900.4800531751209365No Hit
CATAGAGGCTGCAGTGAACAATGATCGTTGGTCTCGTAAAGGCTGGGGTC3840.47266774165753744No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT3830.4714368360803043No Hit
CATAGAGGTGAGCGGCTGTCTCCAGACATGGGTCATTGTGAGGATTAAAT3470.4271242352999101No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG3410.41973880183651113No Hit
CATAGAGCAGCTTGAATTCTCCTCAGATGCCTGGCCAACTGTTTTTTCTA2970.36557895643825167No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGTGTTGTTACAAAAATTGGGAA2890.35573171182038626No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATACGAATGAGGAAA2850.3508080895114536No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC2800.34465356162528776No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2770.3409608448935882No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTATGGGTCATTGTGAGGATTAAA2750.3384990337391219No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG2710.3335754114301892No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG2630.32372816681232386No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT2520.31018820546275894No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC2440.3003409608448936No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT2350.2892628106497951No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG2310.28433918834086236No Hit
CATAGATGGCCCAGAATCCTTTGTAGATATGGGTCATTGTGAGGATTAAA2290.28187737718639605No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2180.2683374158368312No Hit
CATAGATTCCTCCAAAGACTGCAGGGCACATAGATGCCTGGCCAACTGTT2040.2511047377555668No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACGCCATGCTGAAGT1990.24495020986940091No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC1950.24002658756046824No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC1940.23879568198323506No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGCCTGGCCAACTGT1930.2375647764060019No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT1890.23264115409706923No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTTGTTACAAAAATTGGGAAGCGG1860.2289484373653697No Hit
CATAGATCTAGCCCATCACTTCAGCAACACTGACGAATGAGGAAACAGGC1820.224024815056437No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT1810.22279390947920383No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACTTGGTCTCAATCCTGTGTTCA1790.2203320983247375No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1780.21910119274750434No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTCTGAGAAAAGATGC1780.21910119274750434No Hit
CATAGACCAGTACGCCTTACCCCTTGTCATAGACCATGGAGAGAATAATC1780.21910119274750434No Hit
CATAGACCAGTTACCACAAGAAGCAATGCGATCGCCTCTCCAGTTTCTAC1760.216639381593038No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTACACTGTCATTGTGGGTTTTAA1690.2080230425524058No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTAGACCATGGAGAGAATAATCCGT1690.2080230425524058No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG1670.20556123139793947No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1600.19694489235730725No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG1550.19079036447114142No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTTACAAAAATTGGGAAGCGGT1540.18955945889390824No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGTCCTAAATGTCTT1370.16863406408094433No Hit
CATAGATGGGACAGCGACAATGACAGTGTGCCATGCTGAAGTCCCATGAT1360.16740315850371118No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA1340.16494134734924484No Hit
CATAGAACATTGATTCCTGGCATGTCCCATTGTAGATTTCTTTCACCTCC1320.1624795361947785No Hit
CATAGACCAGTTACCACAAGAAGCAATGCCTGGCCAACTGTTTTTTCTAT1280.1575559138858458No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG1270.15632500830861265No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCAGAGGCTATCATTGCAGCAGTC1200.14770866926798043No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1150.1415541413818146No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1140.14032323580458142No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1100.13539961349564875No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1070.13170689676394925No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1060.13047599118671607No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1050.1292450856094829No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1050.1292450856094829No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1040.12801418003224974No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGC1010.1243214633005502No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGAGCCTACAGTTGTGGAAAGTGCA1000.12309055772331703No Hit
CATAGACCAGTTACCACAAGAAGCAATGCTGAAGTCCCATGATCTATGTG990.12185965214608387No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG990.12185965214608387No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA970.11939784099161753No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG970.11939784099161753No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT960.11816693541438436No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGCTCGTATCTTGGCCATCTA960.11816693541438436No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT940.11570512425991802No Hit
CATAGATGCCACCACACCCAGTTAATTTTTGAATTTTTAGTAGAGACGGG940.11570512425991802No Hit
CATAGATGCCACCACACCCAGTTAATTTTTGTATTTTTAGTAGAGATGGG940.11570512425991802No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT930.11447421868268486No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAACAGTTGTGGAAAGTGCAAT930.11447421868268486No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG920.11324331310545169No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG890.10955059637375217No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC880.108319690796519No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGAGACAGTTGTGGAAAGTGCA880.108319690796519No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA830.10216516291035313No Hit
CATAGATGCCACCACACCCAGTTAATTGTTTTGTATTTTTGGTAGAGACA820.10093425733311996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)