FastQCFastQC Report
Tue 7 May 2024
EGAF00005808088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31074
Total Bases4.6 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1470247.312866061659264No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA7432.391066486451696No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT5371.728132844178413No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC4521.4545922636287572No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC2640.8495848619424599No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGGGAGGCGGAGCTTGC2550.820621741648967No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG2510.8077492437407479No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGTGCTCATACAGA2370.7626955010619811No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2330.7498230031537619No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC2160.6951148870438308No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC2070.6661517667503379No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT1940.6243161485486258No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT1840.5921349037780781No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1800.5792624058698591No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG1620.5213361652828732No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA1570.5052455428975993No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1560.5020274184205445No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT1550.4988092939434897No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT1550.4988092939434897No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAGACTCTTCACTA1540.495591169466435No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1400.4505374267876681No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTAGACTTGTGCTCATACAGAATTA1270.4087018085859561No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACTCTTCACTATGTC1170.3765205638154084No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAGCTGCTTTTCTC1130.3636480659071893No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1110.35721181695307974No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1060.3411211945678059No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1050.3379030700907511No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1000.32181244770547723No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA940.3025037008431486No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAAAAGTGATTATCACACCACTGCC910.29284932741198433No Hit
CATAGACTTGATGCCCAGGAAACCTCGGCAGTGAGGTACAGAAATCTATG910.29284932741198433No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC810.2606680826414366No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG790.254231833687327No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT790.254231833687327No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT750.24135933577910793No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA720.23170496234794363No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCTCCCTTGTGCTCATACAGAATTA720.23170496234794363No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTTACAACCAATGCTCTT720.23170496234794363No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC700.22526871339383406No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG660.21239621548561496No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG650.20917809100856022No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC640.20595996653150545No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT640.20595996653150545No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG620.19952371757739587No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGAAGAAGAGAGCCTCTGTCCCTG610.1963055931003411No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTCTGGGAGAGGCTGTTTGA610.1963055931003411No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG610.1963055931003411No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG600.19308746862328635No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACTCTTCACTAT600.19308746862328635No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG590.18986934414623158No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACTGGGAGAGGC580.1866512196691768No Hit
CATAGATCTGTGGCTCCCGATAAATGTGGGACTTCAGTTGACTATAAGAA570.18343309519212203No Hit
CATAGACCCTTAGAGTTTCAGCCTCCGTAGCTGCTTTTCTCTTCTTGGCA570.18343309519212203No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT560.18021497071506726No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG550.17699684623801248No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG550.17699684623801248No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTGAGGCCTGAGATT540.1737787217609577No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG530.17056059728390294No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGTTACAA530.17056059728390294No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGATCTGAGCAAGGATAGCCCT520.16734247280684816No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG510.1641243483297934No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTAGGACCATGCTC500.16090622385273862No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA500.16090622385273862No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGGGCAACAGA480.15446997489862907No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGAGGAATTCTTGCCAGGG480.15446997489862907No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG470.1512518504215743No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC460.14803372594451952No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC450.14481560146746478No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA440.14159747699040998No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGGACCATGCTCACACCTT440.14159747699040998No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG430.13837935251335523No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA430.13837935251335523No Hit
CATAGAATGCAGGAGAATATACACAGGTTGAACAGGGGAGGCAGAGATTG420.13516122803630043No Hit
CATAGACAGGAGGAGGAAGAAGAGGACTGCGGGGCCAGTTCTGCGGCGGG420.13516122803630043No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT410.13194310355924568No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA410.13194310355924568No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACACTGACGACATGGTGGGTGCCT410.13194310355924568No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGTTCTACACAT410.13194310355924568No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCGTCCGCAG410.13194310355924568No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG390.12550685460513614No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC390.12550685460513614No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGTGTACTTCAGTTGACTATAAGAA370.11907060565102658No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG350.11263435669691703No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTTATAGGAAGAGGAGATTTGGA340.10941623221986227No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG340.10941623221986227No Hit
CATAGAACAATGTAATAAGCATCGGAGGAACACTGACAACATGGTGGGTG340.10941623221986227No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA330.10619810774280748No Hit
CATAGATCATGGGACCTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG330.10619810774280748No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG330.10619810774280748No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG320.10297998326575272No Hit
CATAGACTTGATGCCCAGGAAACCTCCACTCAGACATGTTTCCTAGTTTC320.10297998326575272No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT320.10297998326575272No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC320.10297998326575272No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)