FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25471
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1261349.519060892780026No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA7312.8699305092065486No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA5952.335989949354168No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG5812.2810254799575986No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG3981.5625613442738802No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC3291.2916650308193631No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC3281.287738997291037No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA3151.2367005614227944No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG2130.8362451415335087No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG2100.8244670409485297No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC1790.7027600015704134No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA1560.6124612304189079No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1460.5732008951356444No Hit
CATAGAAGATCCCATAGCAGCTTTGCTAATAGTTTTTCCAAATATAAGAT1440.5653488280789918No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1280.5025322916257705No Hit
CATAGAAGGAGGGGAAACTGAGGCCAATTTGTGCTGACTTCCCAAAGCTG1260.49468022456911787No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA1260.49468022456911787No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCAGCA1120.4397157551725491No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACATAGATTAAGTGCAGCTAT960.37689921871932786No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA930.36512111813434883No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA920.36119508460602257No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT910.3572690510776962No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATCTAGGGATTATCAGTAG850.33371284990773825No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATATAAGATCCCATCATCTC830.32586078285108555No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG820.32193474932275923No Hit
CATAGATCATGCAAAGAACACAGGCCAAGGGACAGGTGGACAGGTAGGCA800.3140826822661065No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC770.30230458168112756No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGACACTGACGACATGGTTCT720.2826744140394959No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT680.26697027992619055No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG680.26697027992619055No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT660.2591182128695379No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA660.2591182128695379No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA610.23948804522790626No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACAGCATGTTGA600.2355620116995799No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG590.2316359781712536No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG570.22378391111460091No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG530.2080797770012956No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG530.2080797770012956No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC520.20415374347296927No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG520.20415374347296927No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG450.17667150877468493No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCACACTGACGACATGGTTCTACACA450.17667150877468493No Hit
CATAGAAGATCCCATAGCAGCTTTGCCTAATAGTTTTTCCAAATATAAGA450.17667150877468493No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG430.16881944171803226No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA420.16489340818970594No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT420.16489340818970594No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG410.16096737466137961No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG390.15311530760472697No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG380.14918927407640062No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG370.1452632405480743No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGTGGAGGTTGCAGTGAGCCAAGA360.14133720701974795No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGAGCAGAGTTGGGTGTGTC340.13348513996309527No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG340.13348513996309527No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT340.13348513996309527No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC340.13348513996309527No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA340.13348513996309527No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT320.12563307290644263No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA310.12170703937811628No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC310.12170703937811628No Hit
CATAGACCCTTCTCCATGCCACATCAGTGTGGGGGCAGATTAACAGGTCA310.12170703937811628No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG300.11778100584978995No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGACGACATGGTTCTACACA300.11778100584978995No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG290.11385497232146362No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA280.10992893879313728No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC270.10600290526481097No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCAAGA270.10600290526481097No Hit
CATAGACCCTTCTCCATGCCACATCAGGGTAAAGCCAGAGCTGCTCTGGG260.10207687173648464No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGCGATGGTTTATGCCTGTAAT260.10207687173648464No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)