FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808091

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808091
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25471
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1266549.72321463625299No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA13255.20199442503239No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG6022.3634721840524517No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG4251.668564249538691No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC3211.2602567625927525No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT3181.2484786620077735No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG2050.804836873306898No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG1930.757724470966982No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT1520.5967570963056025No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCAAAGCTGCT1460.5732008951356444No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA1400.5496446939656865No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA1350.5300145263240549No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT1340.5260884927957284No Hit
CATAGATGACCTGTTAATCTGCCCCCAGACCCAGGTGTTTTCCTTTTGAT1250.49075419104079143No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGTCTCATAGAGG1110.4357897216442228No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTACCTCTCTCA1000.3926033528326332No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT990.3886773193043069No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT910.3572690510776962No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC880.3454909504927172No Hit
CATAGATGTGAGCACTACTGATAATCCCTAGATGATGTTTTAAAATGAGC850.33371284990773825No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG780.30623061520945394No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG740.2905264810961486No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG730.2866004475678222No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATGTCGTCAGTGTCCATCAA720.2826744140394959No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA690.27089631345451687No Hit
CATAGATGACCTGTTAATCTGCCCCCATCCTCCCCCACAGTCTCTCCTGC680.26697027992619055No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG670.2630442463978642No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGTCTCATAGAGGGGAGAC650.2551921793412116No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC630.24734011228455893No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA630.24734011228455893No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT610.23948804522790626No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC530.2080797770012956No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA520.20415374347296927No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG520.20415374347296927No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA520.20415374347296927No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA510.20022770994464292No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGCAAAGCTGC490.19237564288799028No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA470.1845235758313376No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA450.17667150877468493No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG450.17667150877468493No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA450.17667150877468493No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA450.17667150877468493No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG410.16096737466137961No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA410.16096737466137961No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGATCA400.15704134113305326No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG390.15311530760472697No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA390.15311530760472697No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA390.15311530760472697No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG380.14918927407640062No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC370.1452632405480743No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA360.14133720701974795No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT340.13348513996309527No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT330.12955910643476895No Hit
CATAGATGACCTGTTAATCTGCCCCCACACTGATGTGGCATGGAGAAGGG320.12563307290644263No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCTCCAAGCAGATCTGTGTTC320.12563307290644263No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG320.12563307290644263No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTCCAGTAGCGT320.12563307290644263No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA310.12170703937811628No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA300.11778100584978995No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA300.11778100584978995No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT300.11778100584978995No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA290.11385497232146362No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA280.10992893879313728No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG270.10600290526481097No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTCCATGGTCAAAACCCTAGTGCT270.10600290526481097No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA260.10207687173648464No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)