FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57553
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1194220.74956996160061No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC760913.220857296752559No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT36916.413219119767866No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA35536.173440133442218No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT16082.7939464493597206No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT15502.693169773947492No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT11882.0641843170642713No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA11702.032908797108752No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA10331.794867339669522No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA9631.6732403176202806No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA6091.0581550918284017No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4200.7297621322954495No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT3990.6932740256806769No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG3720.646360745747398No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA3690.6411481590881448No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG3610.627247927996803No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC3310.5751220614042709No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT3140.5455840703351693No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT3090.5368964259030806No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA3040.5282087814709919No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTCTA2860.4969332615154727No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2840.49345820374263727No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACTGATACAGGAAGGCCTT2710.47087032821920666No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC2610.4534950393550292No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC2570.4465449238093584No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG2420.42048199051309226No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC2040.3544558928292183No Hit
CATAGACAGGGAGGCGTATAAGTGATGGGGAAAGGATTCACAAGCAATGG2010.3492433061699651No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1910.3318680173057877No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1900.33013048841937No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1860.323180372873699No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCTTTCCCTCACTCTCTCCA1860.323180372873699No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1850.3214428439872813No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGATTGTGTTATTGGTAAGG1810.31449272844161036No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1770.30754261289593937No Hit
CATAGACAGGGAGGCGTATAAGTGATGTCCTTTCCCTCACTCTCTCCATC1730.30059249735026844No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1720.2988549684638507No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA1710.297117439577433No Hit
CATAGAGCCAAGGAAAGTTGAATGGACTACACAAAGTCACGAAAGTGGGT1620.28147967959967335No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1560.2710545062811669No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC1540.2675794485083315No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA1470.25541674630340727No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1400.24325404409848314No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1390.2415165152120654No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1380.23977898632564768No Hit
CATAGAACCTCTTTTGGGGCAAAGTTACCTGATTGGCCATTTGAACTCTA1290.22414122634788802No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATACACAGTCA1260.21892863968863482No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1230.21371605302938163No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1200.2085034663701284No Hit
CATAGACCTTTGGGTTCATATCATCTGGATCCTTTCCCTCACTCTCTCCA1120.1946032352787865No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC1110.19286570639236877No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG1080.18765311973311555No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1070.18591559084669781No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1050.18244053307386238No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1040.18070300418744462No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA1010.17549041752819142No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT910.15811512866401406No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTGATCTATCCAGGAATTTTAT900.1563775997775963No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT880.15290254200476083No Hit
CATAGACCTTTGGGTTCATATCATCTGGACGGTAGCAGAATTACCTCTGG880.15290254200476083No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGTGACAAGCAATGGGGAAAGG870.1511650131183431No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC780.13552725314058345No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT730.12683960870849478No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCTAGACATAAGCCAGT720.12510207982207702No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA720.12510207982207702No Hit
CATAGACACCATGCCTGGCTAATTTTTTAAAAATTGATTTTTGTAGAGAC710.12336455093565932No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT680.11815196427640609No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACAAATATGCTCCAAATTT660.11467690650357061No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTGCTTCTTTCAAAAGTCTGGT650.11293937761715288No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTTTAGTAGAGATGGG650.11293937761715288No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG640.11120184873073516No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGATCC630.10946431984431741No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTGAAAATA590.10251420429864645No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTACGGTTGCACAGATCATTTA580.10077667541222872No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)