FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46348
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2232148.15957538620868No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA21334.602140329679814No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG13892.9968930698196257No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG9782.110123414171054No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC5781.2470872529558987No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT5731.2362993009407095No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG4881.052904116682489No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG4881.052904116682489No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT4000.8630361612151549No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT4000.8630361612151549No Hit
CATAGAGGCTGGGTGACTTGGTGAATGATTACAAGTTCTATGTGTAGAAC3890.839302666781738No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG2170.46819711745922155No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA2100.4530939846379563No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACACATGAATGTTGGAGA1880.4056269957711228No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA1880.4056269957711228No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1730.3732631397255545No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACCCCAGGCTCTATG1570.3387416932769483No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG1570.3387416932769483No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT1270.27401398118581166No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT1220.26322602917062227No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTAGCAGAGACTTGGCC1220.26322602917062227No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT1160.25028048675239495No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC1130.2438077155432813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1130.2438077155432813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1110.23949253473720547No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTAGACTTGGCCTCAGTTTCCC1110.23949253473720547No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1100.23733494433416763No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1080.2330197635280918No Hit
CATAGATGATGTGAAAAGGACCCATGGGAAGTAGGGAATGATTACAAGTT1070.23086217312505397No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA1020.2200742211098645No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG1010.2179166307068266No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC940.2028134978855614No Hit
CATAGAGCCAAAGAGATGCTGAAAGGGACTTGGCCTCAGTTTCCCCTCCT920.19849831707948562No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTCTATGGCCTGTGTTCTTTGCATG900.19418313627340986No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA890.19202554587037196No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA880.1898679554673341No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG860.1855527746612583No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC860.1855527746612583No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA860.1855527746612583No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA850.18339518425822043No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA840.18123759385518254No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC790.17044964183999312No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA760.16397687063087946No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGAGACTTGGCCTCAGTTTCCCCT750.16181928022784153No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA740.15966168982480367No Hit
CATAGATACGATCATAAGGGTGGGGCACCAGCGGGCAGGGGGACACCCTC730.15750409942176577No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG680.14671614740657635No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA670.14455855700353845No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG650.14024337619746266No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC640.1380857857944248No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA630.1359281953913869No Hit
CATAGAGGCTGGGTGACTTGGTGAATAGATTTATCCAGCATGCCCCTCTA620.133770604988349No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT600.12945542418227324No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA600.12945542418227324No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG600.12945542418227324No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG600.12945542418227324No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA590.12729783377923534No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA590.12729783377923534No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA580.12514024337619747No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG570.12298265297315956No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGAAATACCTGGGCGACCTCTC560.12082506257012168No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT540.1165098817640459No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT540.1165098817640459No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA530.11435229136100802No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG510.11003711055493225No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA500.10787952015189436No Hit
CATAGAGGTGAGCGGCTGTCTCCAGACTTGGCCTCAGTTTCCCCTCCTTC490.10572192974885647No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGGAATGAATGTTGGAGAGGC480.10356433934581859No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCTACCTAGTGATTACCTGGG480.10356433934581859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)