FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149512
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1556810.412542137085987No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT105967.087056557333191No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT75715.063807587350848No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG58613.920086682005458No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA57743.8618973727861308No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT56103.7522071806945263No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA48953.2739846968805177No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA30552.04331424902349No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA27541.8419926159773128No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG26301.7590561292739046No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA26221.7537053881962652No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT22071.476135694793729No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT18391.2300016052223233No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA17771.188533361870619No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT16111.0775054845096046No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA15181.0153031194820483No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA14700.9831986730162128No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTGCTCCTTCTCACACAAATCT14310.9571138102627214No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT13920.93102894750923No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT13670.9143078816416075No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT12640.845417090267002No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11580.7745197709882818No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTCTCATAGGGCACTG11130.7444218524265611No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG10970.7337203702712826No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT10960.7330515276365777No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGAATGATATTGTTGCAGATTT9340.6246990208143828No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG9010.6026272138691209No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC8680.580555406923859No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8470.5665097115950559No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT8270.5531328589009578No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT7340.4909304938734015No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC7140.4775536411793033No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT6450.43140349938466477No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATAGCTTACACTGCACATGGG6380.42672160094173045No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6260.41869548932527156No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC6260.41869548932527156No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5990.4006367381882391No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5970.3992990529188292No Hit
CATAGATACCTGTCCTCTGCCTCGAGGTCACTGACAGGTCTTAAAGCTCT5850.3912729413023704No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA5660.3785649312429772No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGTCCATCCAGTCCA5630.3765584033388625No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT5500.36786344908769864No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG5340.35716196693242014No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACTCAGACCTTTTTCTGTAGTCA5300.35448659639360053No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5170.34579164214243674No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT5160.34512279950773184No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAGAGTGATCTACAGTTTCAATAC5110.34177858633420727No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC4520.3023168708866178No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA4510.3016480282519129No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA4300.2876023329231099No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGAAGACACAGCACACTCTTCT4070.272218952324897No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT3910.26151747016961846No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC3780.25282251591845467No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCTTACACTGCACATGGGGTCTAT3760.2514848306490449No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG3640.24345871903258604No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG3580.23944566322435656No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGGTAGCAAAACAGAG3530.23610145005083205No Hit
CATAGAAGTACCATCAGAGTGAACAGGAATCTTTGGGAGGCTATTAGTCT3340.2233934399914388No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT3320.22205575472202901No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG3320.22205575472202901No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3070.2053346888544063No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2940.19663973460324252No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2890.193295521429718No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTCCCCAGGTAGCAAAACAGAGTC2880.1926266787950131No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2800.18727593771737386No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAGGACAGGTATCCCCCAGGTAG2610.17456792765798063No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA2530.16921718658034138No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA2530.16921718658034138No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2490.16654181604152174No Hit
CATAGACCACACACACAACTGAGAGTCACTGACAGGTCTTAAAGCTCTAT2440.1631976028679972No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2420.1618599175985874No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2340.15650917652094815No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTCTTCAGCTCTTTGAGGCATC2280.15249612071271873No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG2270.1518272780780138No Hit
CATAGAAGTACCATCAGAGTGAACCGGGCAGAGAGTGTGTTGTATTCTAT2220.14848306490448926No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT2030.13577505484509605No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACTCAGGAATCTTTGGGAGGCTA2030.13577505484509605No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT2010.13443736957568622No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1900.12708010059393227No Hit
CATAGAGGCACAGGGATAATGAGGGAGCTTACACTGCACATGGGGTCTAT1880.12574241532452246No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT1870.12507357268981753No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1860.12440473005511264No Hit
CATAGACCATCCCTTCTACAAGAGGCATAGGGCACTGAGACCACATCTAT1860.12440473005511264No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1850.12373588742040773No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1690.11303440526512921No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA1620.10835250682219488No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1620.10835250682219488No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGTATATCTAGGAGT1610.10768366418748997No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1590.10634597891808015No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAACTTATCTGGGCA1560.10433945101396543No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1520.1016640804751458No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTACATTCTCTCAGGGCTGTT1520.1016640804751458No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1510.10099523784044091No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)