FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808102

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808102
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97230
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2804128.839864239432274No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA44454.5716342692584595No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT28032.882855085878844No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC25152.5866502108402756No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG22732.3377558366759232No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA18991.95310089478556No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA18551.9078473722102232No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT17791.8296821968528232No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA15031.5458191916075286No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13221.359662655558984No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA13011.338064383420755No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT11911.2249305769824128No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10521.081970585210326No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA9751.0027769207034865No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG9300.9564949089787103No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8530.8773012444718709No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7680.7898796667695156No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7430.7641674380335288No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG7000.7199424046076314No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6910.7106860022626761No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA6670.6860022626761287No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA6570.675717371181734No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGCAACATGGCAGAGGTGCTGTGGT5020.5163015530186156No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4910.5049881723747814No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT4360.4484212691556104No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4340.44636429085673146No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA4300.44225033425897353No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4150.42682299701738147No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGGCACAACTGGCATCTGGTG4050.41653810552298676No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGGACACTTTGGACTCTGC3760.386711920189242No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCACATAGACCAAAGCTAGAAA3750.3856834310398025No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3370.3466008433611026No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3330.34248688676334466No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT3310.3404299084644657No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA3300.3394014193150262No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3220.3311735061195104No Hit
CATAGATGCTTCTGATATGTTGCCGTTCTACACATAGATGCTTCTGATAT3140.32294559292399466No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA3140.32294559292399466No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA3090.31780314717679725No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3000.308546744831842No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGTT2810.28900545099249203No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGCTAAAAATCTTGGAGC2800.28797696184305255No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA2780.2859199835441736No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA2750.2828345160958552No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA2710.2787205594980973No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2690.27666358119921836No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGACGACAGTGAAACAAGAT2690.27666358119921836No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2690.27666358119921836No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA2580.26535020055538416No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCATAGATGCTCAGATCTCAAA2520.2591792656587473No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACGGACTACAAGTACCCACCA2440.2509513524632315No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2420.24889437416435256No Hit
CATAGAGAACAGCCCTGAGAGAATGGACATGGTTCTACACATAGAGAACA2410.2478658850149131No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACATAGATCTCCCTCATTATCCCT2390.24580890671603417No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2300.2365525043710789No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC2290.23552401522163943No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2270.23346703692276047No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA2270.23346703692276047No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT2160.22215365627892628No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT2150.22112516712948677No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC2050.21084027563509203No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2010.20672631903733413No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2000.2056978298878947No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATGGTTCTACACATAGAA1990.2046693407384552No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1950.20055538414069735No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCCCTTTGTCAGATGAGTAGGTTGC1860.19129898179574203No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC1700.1748431554047105No Hit
CATAGAATACAACACACTCTCTGCCCTGTCACGGACTACAAGTACCCACC1650.1697007096575131No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1650.1697007096575131No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1600.16455826391031575No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA1550.1594158181631184No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGCAAGGCATGGCTGGCTACCTGAG1530.15735883986423943No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1480.15221639411704208No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA1460.1501594158181631No Hit
CATAGAATACAACACACTCTCTGCCCTGAGAGAATTTGCAAATACAGAAT1420.1460454592204052No Hit
CATAGAATACAACACACTCTCTGCCCTGCTCACATCTGACTAGTTACCTA1400.14398848092152627No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCACAGTGGCACAGCTCCTTCCATT1400.14398848092152627No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA1350.1388460351743289No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1350.1388460351743289No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1330.13678905687544998No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1330.13678905687544998No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1320.1357605677260105No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1310.13473207857657102No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1300.13370358942713156No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGTCTCTGCTCCCTCATT1280.1316466111282526No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1220.12547567623161576No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA1190.12239020878329733No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG1170.12033323048441838No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1170.12033323048441838No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGTTCTACACA1160.11930474133497891No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTACCTGTAGTCCCAGATACTC1150.11827625218553944No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGTGT1150.11827625218553944No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGACGACATGGTTCTACACATAGA1090.1121053172889026No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1080.11107682813946314No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1050.10799136069114472No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1030.10593438239226577No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1020.10490589324282629No Hit
CATAGAAGGAGCTGGACTGGATGGACTCTGCCTCTTGTAGAAGGGATGGT990.10182042579450787No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA980.1007919366450684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)