FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97230
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2799628.7935822277075No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT44594.5860331173506115No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT28472.9281086084541808No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA24972.5681374061503655No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG22972.362439576262471No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA18781.931502622647331No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA18431.8955055024169494No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT17661.81631183791011No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA15191.56227501799856No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA13381.3761184819500154No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA13351.373033014501697No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT11791.2125887071891392No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10601.0901984984058417No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG9660.9935205183585313No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG9450.9719222462203023No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8720.8968425383112208No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7630.7847372210223182No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7360.7569680139874524No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7080.7281703178031472No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG7020.7219993829065103No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTCTGTTTACTCGGAGA6650.6839452843772498No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT6620.6808598169289314No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA5480.5636120538928314No Hit
CATAGATATTCTGCCCCCTCCTCTCCACCTTTGACCACAGCACCTCTGCC5150.5296719119613288No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4980.5121875964208578No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4850.4988172374781446No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4340.44636429085673146No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA4330.445335801707292No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT4310.44327882340841307No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT4150.42682299701738147No Hit
CATAGATCACCAGATGCCAGTTGTGCCACATAGGAGGAGCTGACTTACTG3970.40831019232747096No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGAGGAATCTTTGGGAGGC3750.3856834310398025No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGAGGAGAATGATATTGTTGCAGAT3600.37025609379821045No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA3550.36511364805101304No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3470.35688573485549724No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT3450.35482875655661833No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3370.3466008433611026No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC3240.33323048441838937No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3160.3250025712228736No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT3150.32397408207343414No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA3080.3167746580273578No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACCCCAGGTAGCAAAACAGAG2900.2982618533374473No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2760.2838630052452946No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT2730.28077753779697623No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA2730.28077753779697623No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2700.2776920703486578No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT2690.27666358119921836No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2660.27357811375089996No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCCA2570.2643217114059447No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGAGGAAACATTGGAAAGAT2530.26020775480818675No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2520.2591792656587473No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATGTCTTGCTCCTTCTCAC2460.2530083307621105No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2430.24992286331379207No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2420.24889437416435256No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGATAGCGAGAAGAGTGGAG2350.24169495011827627No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA2340.24066646096883676No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2330.2396379718193973No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2240.23038156947444202No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2190.22523912372724467No Hit
CATAGACACACTGACAATTTGCACCTGGGAAAGGTATGTGGCACATCTAT2140.22009667798004734No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2080.21392574308341047No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC2060.21186876478453154No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2020.20775480818677364No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2010.20672631903733413No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1980.20364085158901574No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCTGTT1910.19644142754293945No Hit
CATAGAAGTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAAT1890.19438444924406048No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC1730.1779286228530289No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1640.16867222050807362No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGACAGGGCAGAGAGTGTGTTG1590.16352977476087627No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1580.1625012856114368No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT1540.1583873290136789No Hit
CATAGATATTCTGCCCCCTCCTCTCCGTCTCTCCTGCTCCCGGGGCTGAG1490.15324488326648153No Hit
CATAGAAACAGCAAAGCCCTCCACCACCATCACAAAGTCCGATTCACTCA1450.14913092666872366No Hit
CATAGACCATCCCTTCTACAAGAGGCATTGAGAGAGGTCTTATTGTTACA1430.1470739483698447No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCTCAGGGCAGAGAGTGTG1420.1460454592204052No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1420.1460454592204052No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1370.14090301347320786No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1330.13678905687544998No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1300.13370358942713156No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT1250.12856114367993418No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1250.12856114367993418No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1240.1275326545304947No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1210.12444718708217628No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCGAGTATCTGGGACTACAGGT1200.12341869793273681No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1180.12136171963385786No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1170.12033323048441838No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1170.12033323048441838No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG1160.11930474133497891No Hit
CATAGAGGCACAGGGATAATGAGGGAGCAGAGACTTGGTCTCATAGGGCA1160.11930474133497891No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT1110.11416229558778154No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1110.11416229558778154No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1090.1121053172889026No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1090.1121053172889026No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1090.1121053172889026No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTAGAACCATGTCGTC1050.10799136069114472No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1020.10490589324282629No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACTTTTCTAATCAA1020.10490589324282629No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAGTCCATCCAGTCCAGCTCCTT1020.10490589324282629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)