FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106996
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2160520.192343639014542No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA102379.567647388687428No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG60335.638528543123107No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG52334.890837040637034No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG39893.7281767542711877No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA34953.266477251486037No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC29422.749635500392538No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT26012.430931997457849No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG19131.787917305319825No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA16151.5094022206437625No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA15881.4841676324348574No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT15091.4103330965643577No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT12901.2056525477587947No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA12161.136491083778833No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA11011.0290104302964598No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC10650.9953643126845864No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT10530.9841489401472953No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA9930.9280720774608395No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT8260.7719914763168716No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG7490.7000261692025871No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG5310.4962802347751318No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGACGACATGGTTCTACAC4760.4448764439792142No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC4750.4439418296011066No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGATCATTGTTCACTGC4500.42057647014841676No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA4440.4149687838797712No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT4290.40094956820815725No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA4170.3897341956708662No Hit
CATAGACGGATTATTCTCTCCATGGTCTGCCCTCTCTGCTGTTCCTTCTA4160.3887995812927586No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG4020.3757149799992523No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA3970.37104190810871435No Hit
CATAGATCCACGTGAGAATAAAGCATACAACACTGACGACATGGCTCAGG3960.37010729373060675No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3790.35421884930277764No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC3680.34393809114359414No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3670.3430034767654866No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC3540.33085348985008783No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT3460.3233765748252271No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA3440.32150734606901193No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG3410.3187035029346892No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA3400.3177688885565816No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC3290.30748813039739803No Hit
CATAGAAATGATGCTGAAGGGCCTGCCGACATGGTTCTACACATAGAAAT3250.3037496728849677No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGGAGACAGCCGCTCACCTC3220.3009458297506449No Hit
CATAGAAGCCATGAACACAGGATTGACATAGAGTGTCTGTTTCCCCACTC3120.291599685969569No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC3060.2859919997009234No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGGTCTACC3000.2803843134322778No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2930.27384201278552467No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2910.2719727840293095No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC2870.2682343265168791No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG2520.23552282328311336No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA2400.22430745074582228No Hit
CATAGACCAACATTTCTTCTCCCAGGGTAATGATGCTGAAGTGATGGGCT2250.21028823507420838No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG2180.20374593442745523No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG2170.20281132004934763No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCATAGAGTGTCTGTTTCCCCACTC2130.19907286253691728No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2120.1981382481588097No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGCTATACCACAC2090.1953344050244869No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGACATGCCAGGAATCAATGTT1960.1831844181090882No Hit
CATAGATCAAGGAAAACACCAGCCCACAGCTTTCCTCATCCATCCTGCCC1960.1831844181090882No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1960.1831844181090882No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC1910.17851134621855022No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCTGAGGAGCTGAGTCATG1840.17196904557179707No Hit
CATAGACACAACAGAGAGAACGGGCTACCGTATCCAAGTAATAACCAGGC1810.1691652024374743No Hit
CATAGATCAAGGAAAACACCAGCCCATGGTTCTACACATAGAGTGTCTGT1750.16355751616882874No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT1730.16168828741261354No Hit
CATAGAGAAGACTCCCTCAACCCACCACTGACGATCATTGTTCACTGCAG1640.15327675800964521No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1610.15047291487532244No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACGCTGTCCTTCTCTGAATCT1570.14673445736289206No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGCTATACCACACTA1560.1457998429847845No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC1540.1439306142285693No Hit
CATAGATGGCCAAGATACGAGCACATCTTGGTCTACCAGTTATTAGTTGA1480.13832292795992374No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGTGTGCTTGAACCAGA1480.13832292795992374No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA1470.13738831358181613No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1390.1299113985569554No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGTAAGAGGTGGAAGGGTAAG1340.12523832666641743No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGGTTCTACACATAGAAATGATG1280.11963064039777188No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1260.11776141164155668No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGACGACATGGTTCTACACATAGAG1220.11402295412912633No Hit
CATAGAGCTTGGGTGCGAACATCAACGATGCTGAAGTGATGGGCTAGATC1180.11028449661669595No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1150.10748065348237318No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGACATGGTTCTACA1140.10654603910426558No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA1140.10654603910426558No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1120.10467681034805039No Hit
CATAGAAATGATGCTGAAGGGCCTGACGACATGGTTCTACACATAGAAAT1090.10187296721372761No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)