FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808111

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808111
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149992
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT66484.432236385940583No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG54423.628193503653528No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA46213.0808309776521416No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT43222.881487012640674No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT40412.6941436876633422No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT39592.639474105285615No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA36252.4167955624299964No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT34462.2974558643127634No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG30282.01877433463118No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA28991.9327697477198784No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA27601.8400981385673902No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA26661.77742812950024No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG23441.5627500133340446No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT22421.4947463864739452No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG19881.325404021547816No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC18171.2113979412235318No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT15821.0547229185556564No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC15621.041388874073284No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC15191.0127206784361833No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC12390.8260440556829698No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT11300.7533735132540402No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT11010.7340391487546003No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCACTGAGCTGAGGGTCACTTCTA10630.7087044642380926No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG9960.6640354152221452No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG9550.6367006240332818No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT9180.6120326417408928No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC8920.5946983839138087No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8910.5940316816896901No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8670.5780308283108432No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA8610.5740306149661315No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATGCTGAAGTCCCATGATCTA8450.5633633793802336No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA7900.5266947570537095No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA7560.5040268814336765No Hit
CATAGAGTCCTTCCCTCTCACACATGTCAACAATGCCTCACACACAGGTC7300.4866926236065923No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGGAAAGGTATGTGGCACATCTAT7240.48269241026188064No Hit
CATAGAGTCCTTCCCTCTCACACATGTCATAGAGTCCATCCAGTCCAGCT7240.48269241026188064No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG7050.4700250680036268No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT6940.4626913435383221No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACGGAAGACACAGCACACT6430.42868953010827243No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTGGTCCATCCAGTCCAGCTCCTTC6270.41802229452237455No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC6220.4146887834017814No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT6100.40668835671235803No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAGATAGCGAGAAGAGTGGAGGCTC6000.40002133447117183No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC5990.3993546322470532No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT5920.39468771667822283No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCCCCAGGTAG5910.3940210144541042No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA5770.3846871833164435No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5740.3826870766440877No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACGGCAACATATCAGAAG5620.3746866499546643No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTCACATAGGAGGAGCTGACTTA5410.36068590324817323No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5400.3600192010240546No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTACTGGGAAAGGTAT5380.35868579657581734No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA5290.3526854765587498No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGTACGATAGCGAGAAGAG5110.3406848365246146No Hit
CATAGACCATCCCTTCTACAAGAGGCATAGGGCACTGAGACCACATCTAT5090.3393514320763774No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAACTTATCTGGGCACGGTG5080.3386847298522588No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT4870.3246839831457678No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT4870.3246839831457678No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGAAGCAGAGGTAGATGGAT4800.32001706757693743No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCTAGGAAACATTGGAAAGATGGG4780.3186836631287002No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG4780.3186836631287002No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG4730.3153501520081071No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG4690.3126833431116326No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA4680.312016640887514No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACACATAGACCTTTTTCTGTAGT4520.3013494053016161No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAACCAAAATGT4410.2940156808363113No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC4410.2940156808363113No Hit
CATAGATCCCATACTCCTCCATTACCCTACACTGACAACAATGCCTCACA4270.28468184969865057No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT4200.28001493412982026No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACACGGCAACATATCAGAAGC4170.2780148274574644No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA4110.2740146141127527No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT4020.2680142940956851No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGCAGAGAGTGTGTTGTATTCTATG3640.24267960957917756No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT3620.24134620513094032No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC3600.2400128006827031No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG3590.23934609845858448No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG3500.23334577844151688No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3500.23334577844151688No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGCTTACACTG3450.23001226732092378No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAACTTATCTGGGCA3420.22801216064856794No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACGGCAACATATCA3410.22734545842444928No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3360.2240119473038562No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGGAGCTGACTTACTGTTC3310.2206784361832631No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT3260.21734492506267No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCACATAGACTCTGTTTACTCGG3220.21467811616619556No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTACACATAGACTCTGTTTACTC3150.2100112005973652No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC3140.20934449837324656No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3080.20534428502853486No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGGATAGCGAGAAG3070.20467758280441625No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT3060.20401088058029762No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGGAGAATGATATTGTTGCAGA3030.20201077390794175No Hit
CATAGATGGGATTATAGGTGTGAGCCATGAGGAGAATGATATTGTTGCAG2990.19934396501146726No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATCAGGGCAGAGAGTGTGTTGT2960.19734385833911142No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCTGTTTACTCG2920.19467704944263695No Hit
CATAGAGGCACAGGGATAATGAGGGAGGCTCTATGTGTAGAACCATGTCG2810.18734332497733214No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCAGGGCAGAG2760.18400981385673904No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC2710.18067630273614593No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACACGGCAACAT2680.17867619606379007No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATCCCCAGGTAGCAAAACAGA2660.17734279161555283No Hit
CATAGAGCAGCATTTCTCTCCAAGGACAGCATTCTCTCAGGGCTGTTCTC2580.17200917382260386No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT2580.17200917382260386No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAAACATTGGAA2550.17000906715024802No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGTCTGTTTACTCGGAGAT2510.16734225825377355No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGAGGAAACATTGGAAAGAT2480.16534215158141768No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAATGGTCCATCCAGTCCAGCTC2470.16467544935729905No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTACAGGGCAGA2470.16467544935729905No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGAAGTGTATTAATTATCT2440.16267534268494319No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT2420.16134193823670595No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAAGAAGTGTATT2210.14734119153021494No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACCGTACAGGGCAGAGA2140.14267427596138463No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGAAGTGTATT2090.13934076484079153No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTAGACCTTTTTCT2060.13734065816843566No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC2030.1353405514960798No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2030.1353405514960798No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATAGAGGAGAATGATATTGTTGC2020.1346738492719612No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1970.13134033815136809No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGTCCATCCAGTCCAGCTC1970.13134033815136809No Hit
CATAGACACACTGACAATTTGCACCTGTACGGTAGCAGTGGTCTCATAGA1900.12667342258253772No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCTAACCTCCCACCC1890.12600672035841912No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGAACAATGCCTCA1860.12400661368606326No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT1850.12333991146194463No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGGTCACTGACAGGTCTTA1850.12333991146194463No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACGGCAACATA1840.12267320923782601No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1840.12267320923782601No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT1780.1186729958931143No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGCATAGACCTTTTTCTGTAGT1710.11400608032428397No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT1710.11400608032428397No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAGGAGGAGCTGACT1680.1120059736519281No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1680.1120059736519281No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGAGCCCCCAGGTAGCAAAACAGA1620.10800576030721637No Hit
CATAGACATGATGTGCTATGAAGCAGAGGTAGATGGATCATCTATGTGTA1600.10667235585897915No Hit
CATAGACACAGGCCAATCTCAGCAGAGACCTTTTTCTGTAGTCAAGTGAT1600.10667235585897915No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT1590.10600565363486053No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCCCCAGGTAGCA1580.1053389514107419No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1570.10467224918662328No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGGAGGAGAATGATATTGTT1540.10267214251426743No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCAACCAAAATG1520.10133873806603018No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)