FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences182720
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6457735.3420534150613No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG88044.8183012259194395No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA83174.551773204903678No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG65903.6066112084063047No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT49742.722197898423818No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC44572.439251313485114No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG37282.040280210157618No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG35061.918782837127846No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG25821.4130910683012259No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA20631.1290499124343256No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT19401.0617338003502628No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA17570.9615805604203153No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG11690.639776707530648No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATCTATGTGTAGAACCATGTC10590.5795753064798599No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT10050.550021891418564No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT8750.4788747810858144No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA8410.46026707530647987No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC8090.44275394045534155No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT8010.4383756567425569No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG7850.4296190893169878No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC7600.4159369527145359No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTAGACTTGGCCTCAGTTTC7560.41374781085814366No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA7240.39623467600700524No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC7200.39404553415061294No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC7130.39021453590192645No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT5490.30045971978984237No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGAAAGCTGTCTGTGTAGGTG5460.2988178633975482No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA5290.2895140105078809No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG5260.2878721541155867No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA5110.2796628721541156No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA5070.27747373029772326No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTAGAGACTTGGCCTCAGTTTCCCC4760.260507880910683No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG4580.2506567425569177No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA4450.24354203152364273No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC4440.2429947460595447No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA4330.23697460595446584No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTTGGCCTCAGTTTCCCCTCCTTC4210.23040718038528896No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTGAGGTAAAACT3780.20687390542907183No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG3660.20030647985989491No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTTGAGGTAAAAC3540.19373905429071803No Hit
CATAGATGATGTGAAAAGGACCCATGGGATGATGTGGCATGGAGAAGGGT3480.19045534150612958No Hit
CATAGATTAGGGGTGACGGACTAGCCGCATGACCTAACACATGTCCTCAA3480.19045534150612958No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT3360.18388791593695272No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG3310.18115148861646235No Hit
CATAGACTTACTGCCCTCACTCCGTCAGTGTACCTCTCTCATAGCAGCAT3290.1800569176882662No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA3200.17513134851138354No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCTTACGCAGTGTGTCTTTAGGCT3190.17458406304728546No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA3110.17020577933450087No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG3060.1674693520140105No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2930.16035464098073554No Hit
CATAGACTGGCGGTGATTGCTTTCCTAGCAGAGACTTGGCCTCAGTTTCC2900.15871278458844132No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA2840.15542907180385288No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA2820.15433450087565675No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2760.1510507880910683No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGACAAGAAGCCAGAAGTGTGTG2740.14995621716287216No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC2700.14776707530647987No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2610.1428415061295972No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT2570.1406523642732049No Hit
CATAGATTAGGGGTGACGGACTAGCCTACGGTAGCAAAGCTGCTATGGGA2500.1368213660245184No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2470.13517950963222417No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT2440.13353765323992994No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA2290.12532837127845886No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2280.12478108581436076No Hit
CATAGACACCATTGGAGACCTGAGCACCTTCCACTCCAAAGCACAGTATC2280.12478108581436076No Hit
CATAGACTTCTGTTTGGTCACATGCTCATCAGTGTACCAGTGTAGCAGAC2240.12259194395796848No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG2220.12149737302977234No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2220.12149737302977234No Hit
CATAGATCCACTGTGCTATCTCTGACACCGTAGCCATGCTGAAGTCCCAT2130.11657180385288968No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGACACTGGGGGCACAAAGTT2030.11109894921190894No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG1970.1078152364273205No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT1930.1056260945709282No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1860.10179509632224168No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG1860.10179509632224168No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC1840.10070052539404553No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)