FastQCFastQC Report
Wed 8 May 2024
EGAF00005808118

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808118
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146477
Total Bases21.9 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA62084.238208046314439No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG50543.450371048014364No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA48343.3001768195689425No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA38982.661168647637513No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA38322.616110379103887No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC37442.5560326877257182No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA35332.411982768625791No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG34062.3252797367504794No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT29021.9811984134027867No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT25951.771609194617585No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA24261.656232719129966No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC23061.5743085945233721No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT22621.544269748834288No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA21751.4848747584945077No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT21261.451422407613482No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC19731.3469691487400752No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA19601.3380940352410275No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG19431.3264881175884269No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG18781.2821125500931887No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA17271.1790246932965587No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG16941.1564955590297454No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC15681.070475228192822No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT15501.058186609501833No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG14981.0226861555056426No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT14030.9578295568587559No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG12260.8369914730640307No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA10590.7229803996531878No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT9840.6717778217740669No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC9590.6547102958143599No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG8420.5748342743229312No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCAGGTGCAAATTGTCAGTGTGTC8240.5625456556319421No Hit
CATAGACCTGTGTGTGAGGCATTGTTTAGACATGTGTGAGAGGGAAGGAC8180.5584494494016126No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG8180.5584494494016126No Hit
CATAGACCCCATGTGCAGTGTAAGCTCATAGAGAACAGCTAAAAATCTTG7860.5366030161731876No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG7800.5325068099428579No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7680.5243143974821985No Hit
CATAGACCCCATGTGCAGTGTAAGCTCACACGCACAACTGGCATCTGGTG7340.5011025621769971No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT7310.4990544590618322No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACTCTCAGTTGTGTGTGTGGTCT7030.4799388299869604No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC6680.4560442936433706No Hit
CATAGATGTGCCACATACCTTTCCCACACGGACTACAAGTACCCACCACC6590.44989998429787614No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT6310.43078435522300423No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG6240.4260054479542863No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6000.4096206230329676No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC5900.40279361264908486No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC5830.3980147053803669No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT5510.37616827215194193No Hit
CATAGAATACAACACACTCTCTGCCCTGCATAGAGACATGTGTGAGAGGG5490.3748028700751654No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA5100.3481775295780225No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC5070.34612942646285766No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTGCCTGTTCACTCTGATGGTACT4850.3311100036183155No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4750.3242829932344327No Hit
CATAGATGATCCATCTACCTCTGCTTCAGGTGCAAATTGTCAGTGTGTCT4720.32223489011926787No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA4680.3195040859657148No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA4610.3147251786969968No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGACCAAAGCTAGAAACTCC4560.3113116735050554No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT4500.3072154672747257No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG4480.30585006519794916No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG4400.3003884568908429No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC4400.3003884568908429No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA4210.2874171371614656No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC4170.28468633300791246No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT4010.2737631163937No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGACCAAAGCTAGAAACT3990.2723977143169235No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC3980.2717150132785352No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG3790.2587436935491579No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGGAGACAGCCGCTCACC3770.25737829147238134No Hit
CATAGAAGTGACCCTCAGCTCAGTGATCTATGCCTGTTCACTCTGATGGT3700.2525993842036634No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG3480.2375799613591212No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTTCTAC3460.23621455928234467No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA3390.2314356520136267No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGGACACTTTGGACTCTGCCTCT3370.23007024993685013No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTAGAGACAGGGTTTCACTCTA3320.22665674474490874No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGTGGTGGAGGGCTTTGCTGT3190.21778163124586114No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG3170.2164162291690846No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT3130.21368542501553145No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC3110.21232002293875488No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAGTGGAGAGGAGGGGGCAG3050.20822381670842519No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC3000.2048103115164838No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAACAGTGAAACAAGATCG2970.20276220840131898No Hit
CATAGACCTGTGTGTGAGGCATTGTTACACTGACGACATGGTTCTACACA2950.20139680632454243No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2950.20139680632454243No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2940.20071410528615416No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA2940.20071410528615416No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT2850.19456979594065962No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT2790.19047358971032996No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT2750.18774278555677684No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGCTCACACCTATAATCCCAT2740.18706008451838857No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA2610.17818497101934092No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACTGACGACATGGCTCACA2580.1761368679041761No Hit
CATAGATGCTTCTGATATGTTGCCGTCATAGATGCTCAGATCTCAAAAGG2540.17340606375062295No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT2520.1720406616738464No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACAAAGTCTCTGC2510.17135796063545813No Hit
CATAGACCCCATGTGCAGTGTAAGCTGGTGGAGGGCTTTGCTGTTTCTAT2500.17067525959706986No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGTCTCTGCTACCGTACG2500.17067525959706986No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA2470.16862715648190502No Hit
CATAGACTCTGTTTTGCTACCTAGGGTGGGGAAAGAGAGCACTCTATGAG2450.16726175440512844No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGAACAGCTAAAAATCTTGGAG2380.16248284713641048No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTGGCTCACACCTATAATCCCA2370.1618001460980222No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCCCTCATTATCCCTGTGC2310.15770393986769254No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGTCATTCTTCTCTGG2300.15702123882930424No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGCTCACACCTA2300.15702123882930424No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA2260.15429043467575115No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGGCTCA2250.15360773363736285No Hit
CATAGATGATCCATCTACCTCTAACTTCATAGCACATCATGTCTATGAGA2250.15360773363736285No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCAGCAACAAAAGTCACT2240.15292503259897458No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC2240.15292503259897458No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2190.1495115274070332No Hit
CATAGAAGTGACCCTCAGCACAGTGAAACAAGATCGTGCCTCTATGAGAC2100.14336721806153868No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG2080.1420018159847621No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2080.1420018159847621No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT2070.14131911494637384No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC2070.14131911494637384No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA2070.14131911494637384No Hit
CATAGATGATCCATCTACCTCTGCTTCATGCACATCTACAAGGACACTCA1930.13176130040893794No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1920.13107859937054964No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGGGGGGCAGAATATGGCTGAG1910.13039589833216136No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGACCAAAGCTAGAAACTCCCAT1910.13039589833216136No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCACTGACGACATGGTTCTACACAT1890.1290304962553848No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1880.12834779521699652No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAAGCTAGAAACTCCCATC1820.12425158898666684No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCCAGGTGCAAATTGTCAGTGTG1730.11810727964117233No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACGGACTACAAGTAC1700.1160591765260075No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA1700.1160591765260075No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC1690.11537647548761922No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCAGTTCTTTTTCTATGAGGTT1660.11332837237245437No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGTAGAGGGTGGGGAAA1640.11196297029567781No Hit
CATAGAGGATCCCCTGACATTTTGGTAGAGACAGGGTTTCACTCTATGAG1630.11128026925728955No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCATCTATGAGAAGACCAAAGCTA1600.1092321661421247No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA1600.1092321661421247No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA1590.10854946510373642No Hit
CATAGACTCTGTTTTGCTACCTGGAGACAGCCGCTCACCTCTATGAGACC1580.10786676406534813No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT1580.10786676406534813No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACTGACGACATGGCTCAC1580.10786676406534813No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1570.10718406302695986No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAATGGAGGAGTATGGGATCTATG1570.10718406302695986No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG1540.10513595991179503No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGTT1510.10308785679663018No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT1480.10103975368146534No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)