FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146477
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT60734.146043406132021No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG50743.4640250687821297No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA47953.2735514790718No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA39192.675505369443667No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA37982.592898543798685No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA36842.515070625422421No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT35452.4201751810864502No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG33642.2966062931381717No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT28511.9463806604449845No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA24201.6521365128996361No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT24151.6487230077076949No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC22241.5183271093755333No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT21571.4725861398035187No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT21461.4650764283812476No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT21441.463711026304471No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC19331.319661107204544No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC19261.314882199935826No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA18931.2923530656690128No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA17281.1797073943349468No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG16441.1223605071103313No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC15281.043167186657291No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT15081.0295131658895254No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG14701.0035705264307706No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT13430.9168674945554592No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG13280.906626978979635No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG11990.818558545027547No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG10240.6990858633095981No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT9760.6663162134669607No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC9360.6390081719314296No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT8690.5932672023594149No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTAAACAATGCCTCACACACAGG8330.5686899649774367No Hit
CATAGACACACTGACAATTTGCACCTGGTCACTGACAGGTCTTAAAGCTC8260.5639110577087189No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8100.5529878410945063No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG8080.5516224390177298No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG8020.5475262327874No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGAGCTTACACTGCACAT7880.5379684182499641No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA7760.5297760057893048No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7700.5256797995589751No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGAGCTTACACTGCACATGGG7380.5038333663305502No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT7370.5031506652921619No Hit
CATAGACCACACACACAACTGAGAGTACGGAAGACACAGCACACTCTTCT7130.48676584037084314No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC6470.44170757183721676No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGAAAGGTATGTGGCACA6380.4355632624917223No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT6040.41235142718652074No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG6030.41166872614813244No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT5980.4082552209561911No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC5870.40074550953392No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT5790.3952839012268138No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT5400.36865856072967085No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTCTATGCAGGGCAGAGAGTGTG5230.35705264307707013No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC5100.3481775295780225No Hit
CATAGACACACTGACAATTTGCACCTGAAGCAGAGGTAGATGGATCATCT4780.32633109634959756No Hit
CATAGAAGTACCATCAGAGTGAACAGGCAGATAGCGAGAAGAGTGGAGGC4730.32291759115765617No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4720.32223489011926787No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT4620.3154078797353851No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG4580.31267707558183194No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGATAGCGAGAAGAGTGGAG4510.307898168313114No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4470.3051673641595609No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG4380.2990230548140664No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA4290.2928787454685719No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG4270.2915133433917953No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG4230.28878253923824215No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGCTTACACTGCACATGGG3960.27034961120175866No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA3930.2683015080865938No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT3880.2648880028946524No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG3870.2642053018562641No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACACTGAAGCAGAGGTAGATGG3820.26079179666432273No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC3810.2601090956259345No Hit
CATAGAAGTACCATCAGAGTGAACAGGCATAGATCACTGAGCTGAGGGTC3660.24986858005011026No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTCAGGGCAGAGAGTGTGTTGTAT3620.2471377758965571No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA3480.2375799613591212No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGGCAACATATCAGAAGCATCT3400.232118353052015No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT3300.2252913426681322No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT3220.21982973436102596No Hit
CATAGAGTGAAACCCTGTCTCTACCAACCAAAATGTCAGGGGATCCTCTA3200.2184643322842494No Hit
CATAGATATTCTGCCCCCTCCTCTCCTTGGTCTCATAGAGCCCCCAGAGG3200.2184643322842494No Hit
CATAGAAACAGCAAAGCCCTCCACCACACATAGGAGGAGCTGACTTACTG3170.2164162291690846No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG3100.21163732190036663No Hit
CATAGACATGATGTGCTATGAAGCAGAGGTAGATGGATCATCTATGTGTA3040.20754111567003694No Hit
CATAGATATTCTGCCCCCTCCTCTCCACTTGGTCTCACTGAGCTGAGGGT3020.20617571359326037No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2980.20344490943970725No Hit
CATAGAGGCACGATCTTGTTTCACTGTTTGGTCTCATAGGGCACTGAGAC2930.20003140424776586No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG2920.1993487032093776No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTATATCTAGG2870.1959351980174362No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT2870.1959351980174362No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGAAACATTGGAAAGATGGGGAT2730.18637738348000027No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2620.1788676720577292No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG2600.17750226998095264No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCTTACACTGCACATGGGGTCTAT2570.1754541668657878No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT2520.1720406616738464No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTAGATGGATCATCTATGTGT2480.1693098575202933No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC2460.16794445544351672No Hit
CATAGGGCACTGAGACCACATCTATGTGTAGAACCATGTCGTCAGTGTAG2440.16657905336674017No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGGTAGCAAAACAGAGTCTATGTG2390.16316554817479878No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTATATCTAGGAG2370.1618001460980222No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCCCCAGGTAGCAAAACAGA2370.1618001460980222No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA2370.1618001460980222No Hit
CATAGATGGGATTATAGGTGTGAGCCACCTCTAGCCAAATTCCTTACCGA2370.1618001460980222No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGAGGAGAATGATATTGTTGCA2330.1590693419444691No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2280.1556558367525277No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGGAGAATGATATTGTTGCAGA2240.15292503259897458No Hit
CATAGAGGCACAGGGATAATGAGGGAGAGGAGAATGATATTGTTGCAGAT2220.151559630522198No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG2220.151559630522198No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGTAGCAGAGACTTTGTCT2210.15087692948380974No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2180.14882882636864492No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAGGAGAATGA2180.14882882636864492No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGAAAGGTAT2140.14609802221509177No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA2130.1454153211767035No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA2120.14473262013831523No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT2110.14404991909992695No Hit
CATAGATACCTGTCCTCTGCCTCGAGCCAAATTCCTTACCGATCTATGTG2060.14063641390798554No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAACCAAAATGT2030.13858831079282072No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA2020.13790560975443245No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1960.13380940352410275No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT1960.13380940352410275No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC1880.12834779521699652No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATGAAGCAGAGGTAGATGGATCA1870.12766509417860825No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATATTCTGCCCCCCCCTCTAGCCA1850.1262996921018317No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGGGCACTGAGACCACATC1790.12220348587150202No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC1740.1187899806795606No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGAAGTGTATTAATTATCT1730.11810727964117233No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC1700.1160591765260075No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCTCATAGAAAAAGAACTGAGGA1650.1126456713340661No Hit
CATAGACACACTGACAATTTGCACCTGGGGTCACTGACAGGTCTTAAAGC1630.11128026925728955No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTACACATAGACCTTTTTCTGTAG1620.11059756821890127No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA1600.1092321661421247No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1580.10786676406534813No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT1580.10786676406534813No Hit
CATAGATCCCATACTCCTCCATTACCCCAGGTAGCAAAACAGAGTCTATG1580.10786676406534813No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTCTCATAGATGGTCACTGACAG1570.10718406302695986No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGTAGCAAAACAGAGTCTATGTGTAG1570.10718406302695986No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAATGTCAGGGGATCCTCTATGTG1560.10650136198857157No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG1550.10581866095018332No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG1550.10581866095018332No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCTGTTTACTCG1520.10377055783501847No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)