FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116242
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG90677.800106674007673No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT83497.182429758607044No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT82577.103284527107241No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG55984.815815281911873No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT41013.527984721529224No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT36283.121074998709589No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT28582.458663822026462No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT22851.9657266736635641No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT22041.8960444589735208No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT21731.8693759570551094No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG18951.6302197140448376No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT17081.4693484282789353No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG16281.4005264878443247No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG15131.3015949484695721No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12241.0529756886495414No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT11751.0108222501333424No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT11651.0022195075790161No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT11540.9927564907692572No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC11170.9609263433182499No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG10270.883501660329313No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG10250.8817811118184478No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9980.8585537069217667No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT9880.8499509643674402No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT9470.8146797198947024No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC9130.785430395209993No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT8570.7372550369057655No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7940.6830577588135097No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7530.6477865143407718No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7210.6202577381669276No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG7120.612515269868034No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6700.5763837511398634No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG6500.5591782660312107No Hit
CATAGATGAGGGATGTAGGCTGTACACTAGATGTGGTTGCATGGGGGTCT5990.5153042790041465No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5900.5075618107052527No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC5810.4998193424063591No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT5800.4989590681509265No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC5710.49121659985203286No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA5630.4843344058085718No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC5590.4808933087868413No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5240.45078370984669913No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT5240.45078370984669913No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC4840.41637273962939386No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4780.411211094096798No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG4640.3991672545207412No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT4590.3948658832435781No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCCCAGTTAGGCTACTTGGGGGT4050.34841107345021594No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA4040.3475507991947833No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3980.34238915366218753No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT3930.33808778238502435No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3900.33550695961872645No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3510.3019562636568538No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3450.296794618124258No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3420.2942137953579601No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA3290.2830302300373359No Hit
CATAGACCAGGACAATCACAGGGCACACTGTCTCTCCCTCTCTCACACAT3210.27614803599387483No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGGCGTGTATGTGAG3100.2666850191841159No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3100.2666850191841159No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATCAGAGTGGGAGTCATTCATGA3100.2666850191841159No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG3040.2615233736515201No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC3010.25894255088522217No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGTCTGGCACAATGA3000.25808227662978955No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT2980.2563617281189243No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA2970.25550145386349166No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2970.25550145386349166No Hit
CATAGATGGCCCACTGACATTTTCCTGTCTCTCCCTCTCTCACACATCTA2940.25292063109719376No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT2860.24603843705373274No Hit
CATAGAACCTCAAGCCGGAAAACCTTACGGTTGCAGGATGAATGGGGACA2780.23915624301027166No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT2760.2374356944994064No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2720.23399459747767587No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2640.22711240343421482No Hit
CATAGAGAAGCCAGGGAACAAAGTGGCTCATAGATGGGTCCCAAAGTAGG2600.2236713064124843No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCTGGGTCCCAAAGTAGGCAATTC2500.21506856385815798No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2460.21162746683642744No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG2430.20904664407012954No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC2400.20646582130383168No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2390.205605547048399No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC2390.205605547048399No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2380.2047452727929664No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2300.19786307874950534No Hit
CATAGAAAAGGGAGGGATTACGGGTGGTCTCATAGATGTGGTTGCATGGG2110.18151786789628532No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2040.17549594810825692No Hit
CATAGAACTGACCATACACTTGCCCTCATAGAACTTTCCCACCGCCCTTT1890.16259183427676743No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGCAAGACTTGGTCTCATAGAAC1880.1617315600213348No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGATGGGTCCCAAAGTAGGCAAT1860.16001101151046954No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC1860.16001101151046954No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1800.15484936597787374No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT1710.14710689767898005No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGCTCCTCTTCTCTTCCCTC1630.140224703635519No Hit
CATAGACAGGGGCCAGAACTCCTAAGGAGACTTGGTCTCATAGACAGGGG1590.13678360661378847No Hit
CATAGAAGGGGTGATGCTCTGATGGACAGGGGTGTGGTGTTCTGTCTATG1590.13678360661378847No Hit
CATAGATCTACTCCTACAATCTTGGCAAAACATGTACACGGCAGGACTGT1500.12904113831489478No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1480.12732058980402952No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1460.12560004129316427No Hit
CATAGAACTGACCATACACTTGCCCTCTGTCTAGGATGAGATAATTGCCC1430.12301921852686637No Hit
CATAGAGGCCATTCTTCTCATGCTGGGGCCCAGGAGTTGACAAACGACAG1380.1187178472497032No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1370.11785757299427058No Hit
CATAGATGGGTCCCATTCTGTTTGCAATGGGTCCCAAAGTAGGCAATTCT1330.11441647597254005No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA1320.11355620171710741No Hit
CATAGACAGGGGCCAGAACTCCTAAGAAAGAAAACCCACAAAAGACGTCT1310.11269592746167478No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTAGAATCTTGAACTCAGGAGTCT1290.11097537895080951No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1280.11011510469537689No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG1270.10925483043994426No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1230.10581373341821372No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCAGGGCTGCATGGTGACTTTTC1230.10581373341821372No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1220.1049534591627811No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1180.10151236214105057No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)