FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69548
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2352033.81837004658653No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC30814.430033933398516No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT21313.0640708575372404No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA16102.3149479496175305No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA15412.2157358946339216No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA10301.4809915454074885No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA8361.2020475067579226No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC8141.1704146776327142No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA7051.0136883878759992No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA5650.8123885661701271No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT5010.720365790533157No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT4320.6211537355495486No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA3970.5708287801230805No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA3890.5593259331684591No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA3510.5046874101340082No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3180.45723816644619547No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT2650.38103180537182957No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2480.3565882555932593No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2470.3551503997239317No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG2430.34939897624662103No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA2320.3335825616840168No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2310.33214470581468913No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2300.3307068499453615No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2190.31489043538275724No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA2110.30338758842813596No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1990.28613331799620406No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTAATAAATGGGGGCAAGGAAG1940.2789440386495658No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG1800.25881405647897854No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1790.2573762006096509No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1690.24299764191637432No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1520.21855409213780413No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1510.21711623626847645No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1320.18979697475125093No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1310.18835911888192328No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA1230.176856271927302No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA1200.172542704319319No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1190.17110484844999135No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG1150.16535342497268074No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1140.1639155691033531No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1130.16247771323402543No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1130.16247771323402543No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGTTTTGGACCTGCG1120.16103985736469775No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG1090.1567262897567148No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTTGTCTCTA1080.15528843388738714No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1060.1524127221487318No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC1050.15097486627940415No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA1000.14378558693276586No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1000.14378558693276586No Hit
CATAGATGCCCTTTTTGTGTACTTCCACCCTTTTTGTGTGCTTCTTTCAA980.14090987519411055No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC950.13659630758612756No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG940.1351584517167999No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCTGTCTCTA930.13372059584747226No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT930.13372059584747226No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG910.13084488410881695No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCGTCTCTA880.12653131650083396No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC880.12653131650083396No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA870.1250934606315063No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG860.12365560476217866No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG850.12221774889285097No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATA840.12077989302352332No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA830.11934203715419567No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG830.11934203715419567No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT820.11790418128486801No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTTGCGTTTTTAGTAGAG800.11502846954621268No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT800.11502846954621268No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA790.11359061367688503No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG780.11215275780755737No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGGAGACAGCCGCTCACCTC780.11215275780755737No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA780.11215275780755737No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTGTAATTTTTGTATTTTT770.11071490193822972No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTTTCTA750.10783919019957439No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT740.10640133433024673No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA740.10640133433024673No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA740.10640133433024673No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCTGTCTCTA730.10496347846091908No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC720.10352562259159143No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCTTCTCTA720.10352562259159143No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCCTCTCTA710.10208776672226375No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA700.10064991085293609No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)