FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences250579
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA155646.211214826461915No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG137955.505249841367394No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC110694.417369372533213No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC103414.126842233387475No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG101774.061393811931566No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG89923.588489059338572No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA85673.418881869590029No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG70802.825456243340424No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG70782.824658091859254No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG63342.5277457408641584No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT56052.236819525977835No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT54242.1645868169319855No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA48601.9395080992421554No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC41511.656563399167528No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT38051.5184831929251852No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT35321.4095355157455334No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT34591.3804029866828427No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA33341.3305185191097417No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA29031.1585168749176906No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA28591.1409575423319591No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT27991.1170129978968708No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG27771.1082333316040052No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC24740.987313382206809No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT23130.9230621879726554No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA21170.8448433428180335No Hit
CATAGACACAACAGAGAGAACGGGCTACCGTACGCTATACCACACTACAC20370.8129172835712489No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG19160.7646291189604875No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT18340.7319049082325334No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG17590.701974227688673No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG16270.6492962299314787No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA16130.6437091695632914No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA14020.5595041882998975No Hit
CATAGACCGCTTCCCAATTTTTGTAACACTGGAGACAGCCGCTCACCTCT13900.5547152794128798No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGAGTGTCTGTTTCCCCACTC13780.5499263705258621No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG13490.5383531740489027No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGATCATTGTTCACT12460.4972483727686678No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC11820.4717075253712402No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT11670.4657213892624681No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG10730.4282082696474964No Hit
CATAGATCATGGGACTTCAGCATGGCTTAGAGATCCCACCATTTGCCATC10670.42581381520398753No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC10580.4222221335387243No Hit
CATAGAAAGGTGCAATCAAGCCAGTTGGAGACAGCCGCTCACCTCTATGA9240.3687459843003604No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC9010.35956724226690984No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA8870.35398018189872255No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA8670.3459986670870264No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC8630.3444023641246872No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT8610.3436042126435176No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGATCATTGTTCACTGC8380.3344254706100671No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTGGAGACAGCCGCTCACC8240.3288384102418798No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG8120.32404950135486216No Hit
CATAGACCCAAGACCCCAGCCTTTACGATCATTGTTCACTGCAGCCTCTA7980.31846244098667487No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT7700.3072883202503003No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTCCCTTCCCCACACCCTCTTC7690.3068892445097155No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTATGGAGACAGCCGCTCACCTC6880.2745641095223462No Hit
CATAGAGCTTGGGTGCGAACATCAACTTCTTCTCCCAAGTATTAGAGCAA6840.272967806560007No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGGCCCCAGTGTGAAT6800.2713715035976678No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGAGACAGCCGCTCACCTCT6420.25620662545544515No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAGACAGCCGCTCACCTCTATG6420.25620662545544515No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCACATAGAGATCCCACCATT6320.2522158680495971No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC6150.2454315804596554No Hit
CATAGAAATGATGCTGAAGGGCCTGCAAATGATGCTGAAGTGATGGGCTA5860.23385838398269607No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGTGGAAGGGTAAGAGAGGGT5850.23345930824211128No Hit
CATAGATGAGGACACCATAAAGACAACAAATGAGAAACCTGGATGCTTCT5810.23186300527977205No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTTCTGAGGAGAATTCAA5800.23146392953918724No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC5790.23106485379860245No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAGGGGTAAGGCGTACTGGTCTA5640.22507871768983034No Hit
CATAGATCATGGGACTTCAGCATGGCGTTCTACAAAGGATTCTGGGCCAT5350.21350552121287097No Hit
CATAGATCATGGGACTTCAGCATGGCATAGAGATCCCACCATTTGCCATC5260.20991383954760773No Hit
CATAGACGTGACTAAAAGCATGTTGGTCCCAACTGTCTCTGAAAAATTTC5250.20951476380702294No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT5230.2087166123258533No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTACGGTGGAGACAGCCGCTCAC5220.2083175365852685No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGAGATCCCACCATTTGCCAT5010.19993694603298762No Hit
CATAGATCATGGGACTTCAGCATGGCTTCTACACATAGAGATCCCACCAT4940.19714341584889397No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGGAGACAGCCGCTCACCTCTA4910.19594618862713953No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGATCATTGTTCA4820.1923545069618763No Hit
CATAGATCATGGGACTTCAGCATGGCCACATAGAGCTGTTCTTCCTTTTC4730.18876282529661303No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGCTATACCACAC4690.18716652233427383No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGGAGACAGCCGCTCACCTCTA4370.17439609863556005No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT4090.1632219778991855No Hit
CATAGACCCAAGACCCCAGCCTTTACTACGGTAGCAGCATAATTTCCCAT4070.16242382641801587No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCAAGGGGTAAGGCGTACT3840.15324508438456533No Hit
CATAGACCAGCAGACACTCCCATCATTCAGGTGGAAGGGTAAGAGAGGGT3780.1508506299410565No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTATTAACTGGGTGTGGTGG3750.14965340271930208No Hit
CATAGACATTTAATCCTCACAATGACCCATGAGGAGCTGAGTCATGGGGT3700.14765802401637806No Hit
CATAGACCAGCAGACACTCCCATCATTCAGAGGTGGAAGGGTAAGAGAGG3580.1428691151293604No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT3560.14207096364819077No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTAGGTGGAAGGGTAAGAGAGGGT3520.14047466068585157No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGGTGGAAGGGTAAGAGAG3470.13847928198292753No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTGGTGGAAGGGTAAGAGAGGGT3390.1352866760582491No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT3270.13049776717123143No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTGGAGACAGCCGCTCACCTCTA3240.129300539949477No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGCTCAGGTATGTCTT2990.11932364643485688No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGCTAATCTGAAATCTTCGTGT2900.11573196476959362No Hit
CATAGACTCATTGCACTTTCCACAACTGTTTGACACTGACGCTATACCAC2890.1153328890290088No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT2870.1145347375478392No Hit
CTGATGACATGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCTA2850.11373658606666959No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCTGAAGTGATGGGCTAG2800.11174120736374557No Hit
CATAGACATTTAATCCTCACAATGACCCATGTTCTTCCTTTTCTGCCTTC2780.11094305588257596No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2690.10735137421731271No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTCATCAAGGAAGTTTCTGTGAG2670.1065532227361431No Hit
CATAGATCATGGGACTTCAGCATGGCTTCTCATTTATTTTAAAGGACTGG2630.10495691977380386No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2520.100567086627371No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)