FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808139

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808139
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences250579
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA155926.222388947198289No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG136515.447782934723181No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC111124.43452962937836No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG103104.114470885429346No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG101564.0530132213792855No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG86713.460385746610849No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA86383.447216247171551No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG70392.8090941379764462No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG70272.804305229089429No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA63362.5285438923453283No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT55232.2040953152498814No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT53452.133059833425786No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT48061.917958009250576No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA41311.648581884355832No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT37591.5001257088582842No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT34631.3819992896451816No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT34521.3776094564987489No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT32941.3145554894863496No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT28661.143751072516053No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA28101.1214028310433037No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT27691.1050407256793267No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG27101.0814952569848233No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC24380.9729466555457561No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT22850.9118880672362807No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA21000.8380590552280918No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACGGTAGCCCGTTCTCTCTGTTG19820.7909681178390847No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG18820.7510605437806042No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17740.7079603637974451No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG17430.6955890158393162No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG15880.6337322760486713No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT15820.6313378216051624No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG13710.5471328403417685No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTTACAAAAATTGGGAAGCGGTCT13650.5447383858982596No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT13600.5427430071953356No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGGCCATGCTGAAG13360.5331651894213003No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGTCCTAAATGTCTT12300.4908631609193108No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT11610.4633269348189593No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGCCATGCTGAAGTCCCATGATC11590.4625287833377897No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG10530.4202267548358003No Hit
CATAGATGGCAAATGGTGGGATCTCTAAGCCATGCTGAAGTCCCATGATC10230.40825448261825614No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACAGTTGTGGAAAGTGCAATGA10170.40586002817474726No Hit
CATAGAGGTGAGCGGCTGTCTCCAACTGGCTTGATTGCACCTTTCTATGT9270.36994321152211473No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC8890.3547783333798922No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG8650.3452005156058568No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG8600.3432051369029328No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTACAAAAATTGGG8450.33721900079416073No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACGAATGAGGAAACAG8340.33282916764772785No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT8300.3312328646853886No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTCTGAATGATGGGAGTGTCTGCTGG8030.32045781968959886No Hit
CATAGAGGCTGCAGTGAACAATGATCGTAAAGGCTGGGGTCTTGGGTCTA7930.3164670622837508No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG7840.3128753806184876No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT7580.3024994113632826No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGACACTGTCAGACCCAGGCTACAC7500.29930680543860416No Hit
CATAGAGGTGAGCGGCTGTCTCCATAGACCAACATGCTTTTAGTCACGTC6850.27336688230059186No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAGTTGATGTTCGCACC6800.2713715035976678No Hit
CATAGAAGTATTCACACTGGGGCCCAGTGTATGAGCATGCCTTTGATAAA6590.26299091304538685No Hit
CATAGAGGTGAGCGGCTGTCTCCACTGTCATTGTGGGTTTTAACTACTCT6530.260596458601878No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAACATGCTTTTAGTCACGTCTATG6280.2506195650872579No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGGTCTGAGAAAAGATGCAGT6110.2438352774973162No Hit
CATAGACCCTCTCTTACCCTTCCACCCTTCCTTTCAATAGCCTTTTAGGT5920.23625283842620493No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT5920.23625283842620493No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTGCAGGCCCTTCAGCATCA5750.22946855083626322No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTTGTCTTTATGGTGTCCTCATCT5750.22946855083626322No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC5690.2270740963927544No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAACACTGACGCCATGCTGAAGTCC5650.22547779343041519No Hit
CATAGACCAGTACGCCTTACCCCTTGTTACAAAAATTGGGAAGCGGTCTA5590.22308333898690635No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACGCCATGCTGAAGTCCCATGAT5230.2087166123258533No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCAACATGCTTTTAGTCACGTC5190.2071203093635141No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT5160.20592308214175967No Hit
CATAGATGGCAAATGGTGGGATCTCTATGCCATGCTGAAGTCCCATGATC5150.20552400640117488No Hit
CATAGAGGTGAGCGGCTGTCTCCACCGTAACCCTGGGAGAAGAAATGTTG5150.20552400640117488No Hit
CATAGAGGTGAGCGGCTGTCTCCATGAGCATGCCTTTGATAAAACATCTA4980.19873971881123317No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAAGCCATGCTGAAGTC4860.1939508099242155No Hit
CATAGATGGCAAATGGTGGGATCTCTATGGCCATGCTGAAGTCCCATGAT4820.1923545069618763No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGGGTCATTGTGAGG4700.18756559807485862No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAGCTCTATGTGGCCATGCTGAAG4670.1863683708531042No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA4500.17958408326316253No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGTCCTAAATGTCTTTGTCCTTCTA4300.1716025684514664No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCAACATGCTTTTAGTCACG4060.16202475067743108No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAGTAAAGGCTGGGGTCT4050.16162567493684626No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT4000.15963029623392225No Hit
CATAGATGCCACCACACCCAGTTAATACACTGTCATTGTGGGTTTTAACT3830.15284600864398054No Hit
CATAGACCAGTACGCCTTACCCCTTGACATGGGTCATTGTGAGGATTAAA3730.14885525123813248No Hit
CATAGACCCTCTCTTACCCTTCCACCTGAATGATGGGAGTGTCTGCTGGT3650.14566264531345405No Hit
CATAGACCCCATGACTCAGCTCCTCATGGGTCATTGTGAGGATTAAATGT3650.14566264531345405No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT3610.14406634235111482No Hit
CATAGACCCTCTCTTACCCTTCCACCTAGATGCCTGGCCAACTGTTTTTT3490.13927743346409716No Hit
CATAGACCCTCTCTTACCCTTCCACCTCTGAATGATGGGAGTGTCTGCTG3480.13887835772351234No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGACGAATGAGGAAACAGGC3450.13768113050175793No Hit
CATAGACCCTCTCTTACCCTTCCACCAGACCAACATGCTTTTAGTCACGT3400.1356857517988339No Hit
CATAGAGGTGAGCGGCTGTCTCCACACCAACATGCTTTTAGTCACGTCTA3230.1289014642088922No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC3140.12530978254362896No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGAGCATGCCTTTGA3050.12171810087836571No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCATCAGTGTAGAACCATGTCGTC2930.11692919199134803No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTCCTTTCAATAGCCTTTTAGG2900.11573196476959362No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT2890.1153328890290088No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGACGAATGAGGAAACAGGCA2790.11134213162316076No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTCAAACAGTTGTGGAAAG2760.11014490440140634No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATGGGTCATTGTGAGGATTAAAT2740.10934675292023674No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG2710.10814952569848232No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGACCAACATGCTTTTAGTCAC2670.1065532227361431No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG2650.10575507125497349No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGAAGCCATGCTGAAGTCC2600.10375969255204945No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)