FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808146

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808146
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120276
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT114609.528085403571785No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA103518.606039442615318No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG74526.195749775516313No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA64835.39010276364362No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA61725.131530812464664No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG52674.379094748744554No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT40933.403006418570621No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG39193.258339153280788No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA24442.03199308257674No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA23481.9521766603478665No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACGGAGATAGAGAGGTT23251.9330539758555323No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG22271.8515747114968906No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA20131.6736506036116932No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA18991.5788686022149057No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT18491.5372975489707006No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA15851.3178023878412983No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA13361.1107785426851575No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC12431.033456383650936No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG9800.814792643586418No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT9550.7940071169643154No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9490.7890185905750108No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA8510.7075393262163691No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCACTCTGATGGTACTTCT7460.6202401144035385No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7310.6077687984302771No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA7160.5952974824570155No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6700.557052113472347No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT5660.47058432272440054No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG5360.4456416907778775No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAGAACAGCTAAAAATCTT5300.44065316438857294No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4870.4049020585985567No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4790.3982506900794838No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAGAGAATTTGCAAATACAGAA4730.39326216369017925No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC4710.39159932156041105No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA4570.37995942665203364No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC4310.35834247896504706No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA4240.3525225315108584No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC4100.34088263660248097No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3820.31760284678572615No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3810.31677142572084205No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTAATTAACTTAGCAACC3750.31178289933153747No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA3670.3051315308124647No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA3440.28600884632013035No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT3350.2785260567361735No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA3270.27187468821710065No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATAGATCACTCTCAGTTGTG3210.26688616182779606No Hit
CATAGATGCTTCTGATATGTTGCCGTACATAGATGCTCAGATCTCAAAAG3140.26106621437360733No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC3100.25774053011407094No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT3090.25690910904918685No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3020.25108916159499817No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT2810.23362931923243208No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2610.21700089793475008No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTGGTGGAGGGCTTTGCTGTT2470.2053610030263727No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2460.2045295819614886No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2430.2020353187668363No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA2360.19621537131264757No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2230.18540689746915426No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT2200.18291263427450197No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2160.17958695001496558No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2110.1754298446905451No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1990.16545279191193588No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACGGAGATAGAGAGGTTGGTTCT1970.16378994978216768No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTCACATAGAACAGCTAAAAAT1910.15880142339286307No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1900.15797000232797898No Hit
CATAGAAGGAGCTGGACTGGATGGACCAAGGGCTGAGAAAGGAGGATCAC1890.15713858126309488No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT1890.15713858126309488No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATTTACTGACATGGGCAAT1860.1546443180684426No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT1850.1538128970035585No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA1840.1529814759386744No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC1820.1513186338089062No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCAGATCCTTGTCAACTCTT1810.1504872127440221No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT1800.149655791679138No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1750.1454986863547175No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT1710.14217300209518108No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1650.13718447570587647No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT1630.13552163357610827No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1630.13552163357610827No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1610.13385879144634008No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTCCAGTGAACTCAAGGGGGTCT1610.13385879144634008No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCTAGACCAAAGCTAGAAA1600.13302737038145598No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1590.1321959493165719No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG1570.13053310718680367No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGAGAATTTGCAAATACAGAATCA1540.12803884399215137No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCACAACTGGCATCTGGTGA1530.12720742292726728No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG1510.12554458079749908No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG1500.12471315973261497No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1490.12388173866773088No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1480.12305031760284678No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1480.12305031760284678No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1470.12221889653796268No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA1450.12055605440819449No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA1430.11889321227842628No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTAGAGAACAGCTAAAAATCTT1390.11556752801888989No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1380.1147361069540058No Hit
CATAGAATACAACACACTCTCTGCCCTGTCCAGTGAACTCAAGGGGGTCT1340.11141042269446938No Hit
CATAGATGCTTCTGATATGTTGCCGTATGTTGCCTTTCCTCAGTTCTTTT1290.1072533173700489No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGACAGCCGCTCACCTCTATG1270.10559047524028069No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1220.1014333699158602No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1210.10060194885097608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)