FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93840
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG70307.4914748508098885No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT66587.095055413469736No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT60076.401321398124467No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG45534.851875532821824No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT29463.139386189258312No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG25762.7450980392156863No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT24142.572463768115942No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT20552.1898976982097187No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT17281.8414322250639386No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT14501.5451832907075873No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT14401.5345268542199488No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG14051.497229326513214No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG13781.46845694799659No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG12981.3832054560954816No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT12851.3693520886615516No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC8890.9473572037510656No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8780.9356351236146633No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG8280.8823529411764706No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT8000.8525149190110828No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT7750.8258738277919864No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG7670.8173486786018755No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG7350.7832480818414321No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT6760.7203751065643649No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT6630.7065217391304348No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT6630.7065217391304348No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC6240.6649616368286445No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5760.6138107416879796No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5710.6084825234441603No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5550.5914322250639387No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGGACAGGGGTGTGGTG5150.5488064791133845No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC5090.5424126172208014No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4930.5253623188405797No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT4790.5104433077578857No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT4780.5093776641091219No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA4650.4955242966751918No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT4590.48913043478260876No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTTGCAGGATGAATGGGGA4360.4646206308610401No Hit
CATAGAACTGTCCCCTACTTTTCACCAGTTAGGCTACTTGGGGGTCTCTA4320.46035805626598464No Hit
CATAGACTTGTTGCCGAGACTGGAGTACTTGTTGCAGGATGAATGGGGAC4260.4539641943734015No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4190.4465046888320546No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT4090.435848252344416No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT4020.42838874680306904No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3940.4198635976129583No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3540.3772378516624041No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG3480.37084398976982097No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT3330.3548593350383632No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT3220.3431372549019608No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA3080.32821824381926684No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2880.3069053708439898No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGCAGACACTTGAAAGC2870.30583972719522595No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2720.2898550724637681No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTAAAGCAGCAAACAATTTC2700.2877237851662404No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2680.2855924978687127No Hit
CATAGAACCTCAAGCCGGAAAACCTTCACTGCTCACGATGGTATTACATG2630.2802642796248935No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT2620.27919863597612954No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2600.27706734867860183No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA2570.2738704177323103No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGGTGGCTTCTGGTGCAT2460.26214833759590794No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTCTCCCTGTCTCTCCCTCTCTC2440.26001705029838024No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2410.2568201193520887No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGTTCTTTGTCCTCTTCACCTCCC2410.2568201193520887No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCTCCTCTTCTCTTCCCTCT2340.24936061381074168No Hit
CATAGAAAAGGGAGGGATTACGGGTGGATCTCAGAGTTAGCTTGCCTCTA2330.24829497016197782No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT2230.23763853367433932No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2210.2355072463768116No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTAGCAGCTCCTCTTCTCT2190.2333759590792839No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG2180.23231031543052005No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGTGCAGAGTGGGAGTCATTCA2180.23231031543052005No Hit
CATAGACAATTTCAGTGCGGCCGATGGTAAAGCAGCAAACAATTTCAGAA2170.2312446717817562No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT2170.2312446717817562No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2100.2237851662404092No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTAGGTGGCTTCTGGTGCA2050.21845694799658993No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2020.21526001705029837No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA1950.20780051150895143No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1920.20460358056265981No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGACAGTTGCAGGATGAATGGGGAC1850.19714407502131287No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1840.19607843137254902No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1840.19607843137254902No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAAAGGAGTTGACAAACGACAG1810.19288150042625746No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCGTCAGTGTTGCTGAAGGAT1790.19075021312872975No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTTGCAGGATGAATGGGGACATCTA1790.19075021312872975No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA1790.19075021312872975No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1780.1896845694799659No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTCTATACATGTACACGGCA1700.18115942028985507No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGATGGGTCCCAAAGTAGGCA1680.17902813299232737No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC1670.1779624893435635No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1620.17263427109974425No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTAGGTGGCTTCTGGTGCAT1610.1715686274509804No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCATAGATGGGTCCCAAAG1590.1694373401534527No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTTGGGTCCCAAAGTAGGCAATTCT1580.16837169650468883No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGGATCTCAGAGTTAGCTTG1580.16837169650468883No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT1530.16304347826086957No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA1530.16304347826086957No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGTAGGTGGCTTCTGGTGCATCT1460.1555839727195226No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1430.15238704177323104No Hit
CATAGACACTTGACCATGCCCTTGTTCACACTGAACGAAATTTAGGTGAG1420.15132139812446715No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT1400.14919011082693948No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT1360.14492753623188406No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1280.13640238704177324No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1260.13427109974424553No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1260.13427109974424553No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1260.13427109974424553No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTACGGTAGCAGCTCCTCTTCTCTT1240.13213981244671782No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1230.13107416879795397No Hit
CATAGATGAGGGATGTAGGCTGTACACACATGTACACGGCAGGACTGTCT1210.12894288150042627No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1200.1278772378516624No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC1190.12681159420289853No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTTGCAGGATGAATGGGGACA1170.12468030690537084No Hit
CATAGACAGGGGCCAGAACTCCTAAGGACAGGGGTGTGGTGTTCTGTCTA1140.12148337595907928No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCTGAGAAGGTAGGTGGCTTCTG1140.12148337595907928No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTCTAGATGGGTCCCAAAGTAGGCA1130.12041773231031544No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTTGCAGGATGAATGGGGA1120.11935208866155159No Hit
CATAGACTTGTTGCCGAGACTGGAGTGCAATGGCGCAATCTCGGCTCACT1100.11722080136402388No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT1040.11082693947144075No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1030.1097612958226769No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCCTCTTCTCTTCCCTCTATGTG1020.10869565217391304No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC1010.10763000852514919No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1010.10763000852514919No Hit
CATAGACACTTGACCATGCCCTTGTTCGGTCTCATAGACACTTGAAAGCT1000.10656436487638535No Hit
CATAGAACTGTCCCCTACTTTTCACCAGACATGGGTCCCAAAGTAGGCAA990.1054987212276215No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTAGCAGCTCCTCTTCTCT960.10230179028132991No Hit
CATAGAACCTCAAGCCGGAAAACCTTGGGTCCCAAAGTAGGCAATTCTAT960.10230179028132991No Hit
CATAGACAGGGGCCAGAACTCCTAAGAAAGAAAACCCACAAAAGACGTCT960.10230179028132991No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGGGTCCCAAAGTAGGCAATTCT950.10123614663256607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)