FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47895
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1019721.29032258064516No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC26385.507881824825138No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA13862.893830253679925No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT13482.814490030274559No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA11942.492953335421234No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA8121.6953753001357135No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA8051.6807599958241988No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA7771.6222987785781395No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC7481.56174966071615No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA6921.4448272262240318No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT3720.7766990291262136No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT3540.7391168180394614No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA3400.7098862094164318No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA3280.6848314020252636No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA2930.6117548804676898No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT2730.5699968681490761No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA2510.5240630545986011No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG2300.48021714166405677No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2200.45933813550475No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1760.3674705084038No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1680.3507673034763545No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1570.327800396701117No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1400.2923060862302954No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1390.29021818561436474No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA1330.27769078191878066No Hit
CATAGATCATGGGACTTCAGCATGGCTACCGTATGACTGATACAGGAAGG1140.2380206702160977No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1070.22340536590458293No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1060.22131746528865226No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1050.2192295646727216No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA1040.2171416640567909No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA1030.21505376344086022No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCGTCTCTA1020.21296586282492955No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA970.2025263597452761No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA960.20043845912934544No Hit
CATAGATCATGGGACTTCAGCATGGCTCTAAATGACCTTCTCTTCTGTCT960.20043845912934544No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC950.19835055851341477No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA950.19835055851341477No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCATCTCTA950.19835055851341477No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA940.19626265789748407No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC930.1941747572815534No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA910.18999895604969202No Hit
CATAGATCATGGGACTTCAGCATGGCGTGCGTGGAAAGTGCTGCGCAGTT900.18791105543376135No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA820.1712078505063159No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCGTCTCTA790.16494414865852383No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG790.16494414865852383No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCTTTCCCTCACTCTCTCCA770.1607683474266625No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC740.15450464557887045No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA730.15241674496293975No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG720.1503288443470091No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG720.1503288443470091No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA700.1461530431151477No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCGTCTCTA680.14197724188328634No Hit
CATAGATGTATACAAGCTGTCACAGACAACATCCTTTCCCTCACTCTCTC680.14197724188328634No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG670.1398893412673557No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAAATA660.137801440651425No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT650.13571354003549432No Hit
CATAGATCATGGGACTTCAGCATGGCTCCTTTCCCTCACTCTCTCCATCT640.13362563941956362No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC630.13153773880363293No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA630.13153773880363293No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG630.13153773880363293No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCATCTCTA610.12736193757177158No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG610.12736193757177158No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG600.1252740369558409No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCTGTCTCTA570.11901033510804886No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCGTCTCTA570.11901033510804886No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCGTCTCTAC570.11901033510804886No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA570.11901033510804886No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTGTA560.11692243449211819No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA560.11692243449211819No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC560.11692243449211819No Hit
CATAGATCATGGGACTTCAGCATGGCTAACATGGTGAAACCCCGTCTCTA550.1148345338761875No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA550.1148345338761875No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCTGTCTCTA540.1127466332602568No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCGTCTCTA530.11065873264432613No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCGTCTCTA530.11065873264432613No Hit
CATAGATCATGGGACTTCAGCATGGCCCCGCCCTGCCCTGCTCTCCCAAC530.11065873264432613No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG530.11065873264432613No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACGGTACCATTTTCCCCCAAGT530.11065873264432613No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG510.10648293141246477No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACATGGAGACAGCCGC510.10648293141246477No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCTGTCTCTA500.10439503079653409No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTTTCTA500.10439503079653409No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTGCTGGCTTGACTTTTCATC490.10230713018060342No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTTGTCTCTA490.10230713018060342No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGCCTCTA480.10021922956467272No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACACTGACTGATACAGGAAGG480.10021922956467272No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC480.10021922956467272No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG480.10021922956467272No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG480.10021922956467272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)