FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95382
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3148133.00517917426768No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG60256.316705458052882No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG25782.702816044956071No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT21412.2446583212765514No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT18181.9060200037742971No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG16381.7173051519154559No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11981.2560021807049548No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA11251.179467824117758No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC10311.0809167348136965No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT9551.0012371306955192No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA8610.9026860413914576No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT8230.8628462393323688No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA8210.8607494076450484No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5960.6248558428214968No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC5650.5923549516680295No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGATGGGTTTTTGCCAGA5520.5787255457004467No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGCTCTTTGACTTATG5470.5734834664821455No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGAAGGCTTGTGAGGGCTGA4920.5158205950808329No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGTCTTTTGCAAGTTTG4910.5147721792371727No Hit
CATAGACCATCTGCGCATCCTGTCTGTACGGTAGCAGAGGCACTTGGTCC4820.5053364366442306No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG4750.4979975257386089No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG4410.4623513870541612No Hit
CATAGACCATCTGCGCATCCTGTCTGGGATGGGTTTTTGCCAGATAGCTC4330.45396406030487935No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCAGAGGCACTTGGTC4260.4466251493992577No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4190.4392862384936361No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTTGCTCTTT4080.42775366421337363No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGTACGGTAGGGATAGTTTGAGG4060.4256568325260532No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG4030.4225115849950724No Hit
CATAGAAGCAGCATTGATCATCCTCCAATAGAAGCAGCATTTTAACACAG3910.4099305948711497No Hit
CATAGAAGCAGCATTGATCATCCTCCATACACATAGACACATGTAGGATG3890.40783376318382925No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT3520.36904237696840075No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG3500.3669455452810803No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA3360.3522677234698371No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATATCGTCAGTGTAAAGTGGG2910.30508901050512677No Hit
CATAGACCATCCTCCCACCTTGACCTCTCTATGAGCGGAGGCACTTGGTC2610.27363653519531983No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTTAAAGTGGGGAAAGG2570.26944287182067894No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2570.26944287182067894No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAAGGAAGCAAGCATATC2490.2610555450713971No Hit
CATAGAAGGTGATAATCATGACAGCCAAGTCTAGCATTTTAACACAGCAT2470.25895871338407667No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2460.25791029754041644No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2450.2568618816967562No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTTGCTCTTT2440.255813465853096No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2400.25161980247845506No Hit
CATAGACATGAGTGGCCGAACAGACCCGGTAGCAAGGCTTGTGAGGGCTG2370.24847455494747434No Hit
CATAGACATGAGTGGCCGAACAGACCGCTGGCCGCTTCCCTGCTTGTCTT2300.24113564404185275No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG2270.2379903965108721No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTAGGGATAGTTTGAGGGTAA2090.21911891132498795No Hit
CATAGACCATCCTCCCACCTTGACCTCAAATGGCTTCCCTGCTTGTCTTT2030.2128284162630266No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2030.2128284162630266No Hit
CATAGATGACATAGACCTTATACCCTCATCATACGGTAGCAGAGGCACTT1990.20863475288838565No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1950.20444108951374473No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1940.2033926736700845No Hit
CATAGAGGGACGGAGGCAAGAGGATACATGCCTAGCCATTTTTGGTTCTA1840.1929085152334822No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1810.18976326770250151No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCATTTTAACACAGCATTGAAGT1790.18766643601518107No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA1780.18661802017152085No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTTAGGGATAGTTTGAGGGTAATG1780.18661802017152085No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1770.1855696043278606No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1670.17508544589125832No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1620.16984336667295716No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG1620.16984336667295716No Hit
CATAGACCATCCTCCCACCTTGACCTTACGGTAGCAGACACTCTTGGTCT1590.16669811914197646No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCCATCCTACATGTGTCTA1590.16669811914197646No Hit
CATAGAGATCAATCCCTGTCTACATAACCAGTAGGGATAGTTTGAGGGTA1560.16355287161099577No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1520.15935920823635488No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1460.1530687131743935No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTACCTCTTCACAGGG1450.15202029733073325No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTAGGGATAG1440.15097188148707302No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1420.14887504979975258No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1420.14887504979975258No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1410.14782663395609236No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1400.14677821811243214No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA1400.14677821811243214No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1390.14572980226877189No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1380.14468138642511166No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1350.14153613889413097No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1350.14153613889413097No Hit
CATAGACTCAAGAAACTTACAATCATGGCAAAAGGCAAAGGAGAAGCAGG1340.14048772305047075No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1310.13734247551949005No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1310.13734247551949005No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTGCTCTTTG1300.1362940596758298No Hit
CATAGACCATCTGCGCATCCTGTCTGTCCCATCTCAAGTCTCACTCTTCT1300.1362940596758298No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGGGTTGAAGGCATGGATATCAA1230.12895514877020822No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1230.12895514877020822No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1210.12685831708288775No Hit
CATAGAAGGTGATAATCATGACAGCCAATTGATCTTCGACAAAGCAAACA1140.11951940617726615No Hit
CATAGAAGCAGCATTGATCATCCTCCAGAGACTTGGTCTCATAGAAGCAG1110.11637415864628546No Hit
CATAGACATGAGTGGCCGAACAGACCGTACACCCAGTACAGGAGCACCCT1100.11532574280262523No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1090.114277326958965No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1090.114277326958965No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGTATAAAATACGCACATAGACC1070.11218049527164453No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1060.11113207942798431No Hit
CATAGACTACCACTACCCAGCACAGCCACCCCATCCTACATGTGTCTATG1030.10798683189700363No Hit
CATAGCGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1030.10798683189700363No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1010.10589000020968316No Hit
CATAGATTGCACATAAAGTCTGATCCCAGTCTTTTGCAAGTTTGTCTGCT960.10064792099138203No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTAGCATTTTAACACAGCATT960.10064792099138203No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)