FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences208958
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA175828.414131069401506No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT175268.387331425453919No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG173498.302625407976723No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA110625.293886809789527No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA93954.4961188372783045No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA87074.166866068779372No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG79593.8088993960508812No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA32471.5539007838895855No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA31891.5261440098010126No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG31821.5227940543075642No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31451.5050871466993365No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG30551.4620162903549996No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT24631.1787057686233597No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA24221.1590846007331617No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT21511.0293934666296576No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC21171.013122254232908No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA19450.9308090621081748No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA17970.859981431675265No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTAGACCAAAGCTAGAAACTCCC14400.6891337015093942No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAACAGCTAAAAATCTTGGAGCTC13990.6695125336191962No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG13880.6642483178437772No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACGGAGATAGAGAGGTTGGT13230.6331415882617559No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAACTTAGCAACCTGTACATT12190.583370820930522No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGAACATTAGCTTAGTTAATTAG12070.5776280400846103No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA10710.512543190497612No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCGAGGCAGAGGACAGGTATCT10110.4838292862680539No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA9790.4685152040122895No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT9630.46085816288440734No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9450.45224399161553996No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG9430.45128686147455466No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTACGGAGATAGAGAGGTT9370.44841547105159885No Hit
CATAGATGCTTCTGATATGTTGCCGTATCCTTGGAGAGAAATGCTGCTCT9330.44650121076962834No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9080.4345370840073125No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACAGCTAAAAATCTTGGAGC8680.415394481187607No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT8610.4120445256941586No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG7750.370887929631792No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG7740.3704093645612994No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT7490.3584452377989835No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA7400.3541381521645498No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7240.3464811110366677No Hit
CATAGATCATGGGACTTCAGCATGGCAAACTAACACAGAAACAGAAAACC7170.3431311555432192No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGAGAATTTGCAAATACAGAATCA7080.3388240699087855No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTGTAGACCAAAGCTAGAAACTCCC7060.33786693976780025No Hit
CATAGATGCTTCTGATATGTTGCCGTAACATGTGTGAGAGGGAAGGACTC7010.3354741144153371No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACATGGTGGAGGGCT6640.31776720680710957No Hit
CATAGACCCCATGTGCAGTGTAAGCTGTACAGGTGCAAATTGTCAGTGTG6620.31681007666612426No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT6130.2933603882119852No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5980.28618191215459565No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGACATGTGTGAGAGGG5610.26847500454636813No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG5560.266082179193905No Hit
CATAGACCCCATGTGCAGTGTAAGCTTAGTAGGGTGGGGAAAGAGAGCAC5500.26321078877094917No Hit
CATAGATGCTTCTGATATGTTGCCGTACTACAGTGAAACAAGATCGTGCC5470.26177509355947126No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACAGGTGCAAATTGTCAGTGTGT5430.2598608332775007No Hit
CATAGACCTGTGTGTGAGGCATTGTTCAGTGTTAGGGTGGGGAAAGAGAG5380.25746800792503755No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA5230.250289531867648No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAGGGTAATGGAGGAGTATGGGATC5130.2455038811627217No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGTTTAGTTAATTA5090.24358962088075115No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT5080.24311105581025852No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT5060.24215392566927324No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG5030.24071823045779533No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACATGTGTGAGAGGGAAGGAC4930.235932579752869No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG4890.23401831947089846No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA4890.23401831947089846No Hit
CATAGACCCCATGTGCAGTGTAAGCTAATGTACAGGTGCAAATTGTCAGT4890.23401831947089846No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACTCTCAGTTGTGTGTGTGGTCT4630.22157562763808997No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG4620.22109706256759734No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT4520.216311411862671No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT4500.21535428172168572No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGGACACTTTGGACTCTG4380.20961150087577407No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA4100.1962116789019803No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT4050.1938188535495171No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC4000.19142602819705395No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3910.18711894256262024No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGTCATTCTTCTCTGGGGGC3900.1866403774921276No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT3740.17898333636424546No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACAGCTAAAAATCTTGGA3480.16654064453143694No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG3360.16079786368552532No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT3230.15457651776912107No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACGGACTACAAGTACCCACCAC3180.15218369241665788No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGCTACCGTAGGAGAGGAGGGGGCA3170.15170512734616526No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG3140.15026943213468735No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA3070.14691947664123892No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCTATAGGGTGGGGAAAGAGAG2990.14309095607729783No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2980.1426123910068052No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGCAGGACACTTTGGACTCTGCCT2820.13495534987892302No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA2810.1344767848084304No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2690.12873400396251877No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCACTGACGACATGTGTGAGAGGGA2670.12777687382153352No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC2620.12538404846907034No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA2550.1220340929756219No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAACGCAAACTAACACAGAA2540.12155552790512926No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGAGTATACTCTCAGTTGTGTGTGTG2500.11964126762315871No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2480.11868413748217345No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC2430.11629131212971028No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGGGAGAGGAGGGGGCA2400.11485561691823237No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2390.11437705184773975No Hit
CATAGATGATCCATCTACCTCTGCTTCACACGGACTACAAGTACCCACCA2160.10337005522640913No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2140.10241292508542385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)