FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170952
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3613121.135172446066733No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA125787.357620852636998No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTACTTCAGTTGACTATAAG91875.374023117600262No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC89575.239482427815996No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA58673.431957508540409No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC57533.3652721231690768No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA56003.2757733164864993No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG55393.240090785717628No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC54073.1628761289718756No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG52493.0704525246852916No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA51993.0412045486452337No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCACTTCAGTTGACT28261.6530956057840798No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA26261.5361037016238477No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG25611.4980813327717721No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT16180.9464645046562778No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC15540.9090270953250036No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC12890.754012822312696No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG12540.7335392390846553No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG12300.7195002105854275No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT11680.6832327202957555No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT11550.6756282465253404No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT10830.6335111610276569No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG10460.6118676587580139No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC10270.6007534278627918No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACTTCAGTTGAC8890.5200290139922318No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG8810.5153493378258225No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACTCTTCACTAT8530.49897047124338995No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT8060.4714773737657354No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT8040.4703074547241331No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGATCTGAGCAAGGAT6510.38080864804155556No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT6250.3655997005007254No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT5620.32874725069025224No Hit
CATAGATCTGTGGCTCCCGATAAATGTGATCTGAGCAAGGATAGCCCTCT5590.32699237212784876No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT5540.324067574523843No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGGTTCTACACATAGATCAT5340.31236838410781975No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC4750.27785577238055126No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA4500.26323178436052225No Hit
CATAGACCCTTAGAGTTTCAGCCTCCTCAGACATGTTTCCTAGTTTCAGT4370.2556273105901072No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA4150.24275820113248162No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGATCTGAGCAA4050.23690860592447002No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC3920.22930413215405493No Hit
CATAGAACAAGGCCAGAATTACCCTGGTCTCATAGACTTCAGTTGACTAT3800.222284617904441No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGGTCTTACTCTTCCCGTCTATGAG3680.21526510365482707No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA3510.20532079180120735No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC3390.1983012775515934No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3180.18601712761476905No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTCAGACATGTTTCCTAG3100.18133745144835978No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3070.1795825728859563No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC2900.16963826103233656No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC2810.16437362534512612No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2680.15676915157471102No Hit
CATAGATTAGTTCCTATTCTTGGTATGGCACTACTTCAGTTGACTATAAG2660.1555992325331087No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC2580.15091955636669943No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2480.1450699611586878No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT2440.1427301230754832No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2410.1409752445130797No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGGTGAGAAATGATGATGGCTCT2410.1409752445130797No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG2320.13571060882586924No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT2310.1351256493050681No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2210.12927605409705648No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT2210.12927605409705648No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT2180.127521175534653No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCCTGAGATTGCTGCTATCTATG2160.12635125649305068No Hit
CATAGAACAATGTAATAAGCATCGGAGGACATGGATGAAGCTGGATCTAT2120.12401141840984604No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTGGGAGAGGCTGTTTGAGA2110.12342645888904488No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC1970.11523702559782863No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT1970.11523702559782863No Hit
CATAGATTCTCCCTTGTGCTTTTGGTATAGATTCTCCCTTGTGCTCATAC1930.11289718751462399No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTTTCTGTTCATATTGAGGAAT1870.10938743038981702No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)