FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808161

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808161
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241054
Sequences flagged as poor quality0
Sequence length150
%GC33

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT2662311.044413284990085No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG181047.510350377923619No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC166736.916707459739311No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG157586.5371244617388635No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG135025.601234578144316No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA123475.12208882656998No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT112974.68650177968422No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG94493.9198685771652824No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG79673.3050685738465244No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC67352.793979772167232No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC62082.5753565591112366No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT54282.2517776099961004No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA47901.9871066234121815No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG45271.8780024392874624No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG37291.546956283654285No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT33241.378944136998349No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT32151.3337260530835413No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA23150.9603657271814614No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT21070.8740780074174251No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC19560.8114364416271873No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT17140.7110439984401835No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG16760.6952798957909846No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT16280.675367345076207No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT14510.6019398143154646No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG11180.46379649373169496No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTCCTTTCAATAGCCTTTTAGG11050.4584035112464427No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT10560.4380761157251073No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT9920.4115260481054038No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG9770.40530337600703575No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG8070.3347797588921984No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC7660.3177711218233259No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG7420.3078148464659371No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG7370.30574062243314776No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC7240.3003476399478955No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG6930.2874874509446016No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT6270.26010769371178244No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCAGTCTTCAGCCCACCCATGCC6210.2576186248724352No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT5790.2401951429970048No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC5450.22609041957403733No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA4870.20202942079368108No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC4740.1966364383084288No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT4710.19539190388875521No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT4670.19373252466252375No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCTATGTGAGCCCGTTCTCTCTG4410.1829465596920192No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGAGACAGTTGTGGAAAGTGC4260.1767238875936512No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCTGTTATAGAAAACAAGGAGA4190.17381997394774615No Hit
CATAGATGGGACAGCGACAATGACAGGCCCTTCAGCATCATTTCTATGTG4150.17216059472151468No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCGCAGGCCCTTCAGCATC3940.16344885378379947No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC3860.16013009533133654No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC3840.1593004057182208No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCAGACCCAGGCTACACA3820.15847071610510508No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG3610.14975897516738987No Hit
CATAGATGACATGGGAAATTATGCTGCTACTTGGTCTGAGAAAAGATGCA3580.14851444074771628No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3550.14726990632804268No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT3540.1468550615214848No Hit
CATAGATGGGACAGCGACAATGACAGTGTACAGTTGTGGAAAGTGCAATG3520.14602537190836906No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT3340.13855816539032748No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT3200.13275033809851733No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG3160.13109095887228586No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT2860.11864561467554988No Hit
CATAGAGGCTGCAGTGAACAATGATCGTGCATAAAAACTGTCGGAGGTCT2830.11740108025587628No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC2780.11532685622308693No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT2770.11491201141652907No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2750.11408232180341335No Hit
CATAGAAGTCTCGCTCTGTCATGCAAGTCCCATGATTTACCATCACAAAT2750.11408232180341335No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTGGGGGTGGGTTGAGGGAGTCTT2590.10744480489848747No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAAGACATGCCTGGCCAACTGT2580.10702996009192961No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2500.10371120163946669No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG2420.10039244318700373No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)