FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808162

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808162
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127125
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3151324.788987217305802No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC51944.085742379547689No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC44393.491838741396264No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA25011.9673549655850542No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA23581.854867256637168No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA23041.8123893805309734No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT22651.781710914454277No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA21941.7258603736479843No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA21291.6747295968534908No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC20801.6361848574237954No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG18921.488298918387414No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA18821.480432645034415No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT18631.4654867256637167No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA16491.297148475909538No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA15211.1964601769911505No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA11020.8668633235004917No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTAATAAATGGGGGCAAGGAAG9010.7087512291052114No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA8900.7000983284169124No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGACTGATACAGGAAG7940.624582104228122No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7840.6167158308751229No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT7490.5891838741396264No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG7250.5703048180924287No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT7070.5561455260570305No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG6950.5467059980334317No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA6610.519960668633235No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT5760.45309734513274336No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGCTTCCTTCTGCTGGCTAT5090.40039331366764996No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACGGTTGCACAGATCATTTAAG4560.35870206489675516No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGTTGCTTCCTTCTGCTGGCTA4490.3531956735496558No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4380.3445427728613569No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGGAGACAGCCGCTCACCTCTA4260.3351032448377581No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC4240.33352999016715834No Hit
CATAGACAGGGAGGCGTATAAGTGATGCTTCCTTCTGCTGGCTATTCTAT3810.29970501474926253No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT3720.2926253687315634No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCATCTCTA3610.28397246804326454No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATACCTGATTGGCCATTTGAACT3490.2745329400196657No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG3380.2658800393313667No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC3270.25722713864306784No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA3250.2556538839724681No Hit
CATAGAACTTCACAAGGGCTTTAGGGACACTGACTGATACAGGAAGGCCT3250.2556538839724681No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTACCATTTTCCCCCAAGTC3120.24542772861356932No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGGAGACAGCCGCTCACCT3070.2414945919370698No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3030.2383480825958702No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGATCTATCCAGGAATTTT2870.22576204523107177No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2750.21632251720747295No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA2690.21160275319567357No Hit
CATAGATCATGGGACTTCAGCATGGCTATACAAGCAATGGGGAAAGGATT2660.20924287118977386No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2470.19429695181907572No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2340.184070796460177No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACAAGCAATGGGGAAAG2290.1801376597836775No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACTGATACAGGAAGGCCT2220.17463126843657817No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTAACAAGCAATGGGGAAAG2220.17463126843657817No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2070.16283185840707964No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2030.15968534906588003No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1980.15575221238938053No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1960.15417895771878073No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1960.15417895771878073No Hit
CATAGATTGGAACTTTGCCAGCCTTAACACTGGAGACAGCCGCTCACCTC1880.14788593903638153No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1860.1463126843657817No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1860.1463126843657817No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC1840.14473942969518191No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG1800.1415929203539823No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAAGGTGAAACCCCATCTCTA1800.1415929203539823No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1790.1408062930186824No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATA1760.13844641101278268No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1710.13451327433628318No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA1680.13215339233038348No Hit
CATAGATGTCCATCATGTGGAAGCTGTACGGTAGCAGAATTACCTCTGGA1610.12664700098328419No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1500.11799410029498525No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG1500.11799410029498525No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA1460.11484759095378565No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1420.11170108161258603No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCTGTCTCTA1340.10540806293018681No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGAGCTGCCTTCCTAACCATGGGCA1340.10540806293018681No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1330.10462143559488693No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)