FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91234
Sequences flagged as poor quality0
Sequence length150
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2932832.145910515816475No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG47295.183374619111296No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG26642.9199640484906944No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC24392.6733454633141154No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT21202.323695113663766No Hit
CATAGAACTCCATCATAAGTCAAAGAGCACACTGCCATCACAGTTCATTG18572.0354253896573646No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA16781.839226604116886No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA14661.6068570927505097No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG12181.3350286077558804No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11341.2429576692899578No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT10091.1059473441918584No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT9201.0083959927220114No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA8900.9755135146984676No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA7490.8209658679878116No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT7240.7935638029681916No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG6390.7003967819014841No Hit
CATAGAGGTGTCCTTTCCCCACTTTACGTTTTTGTTTGCTTTGTTGAGGA6260.6861477080912818No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT5760.631343578052042No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT5720.6269592476489028No Hit
CATAGAGCATTACCCTCAAACTATCCCTAACACTGACGACATGGTATATT5710.625863165048118No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA5170.5666747046057391No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT5060.5546177959971064No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC4520.4954293355547274No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4280.4691233531358923No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA4000.43843304031391805No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC3960.4340487099107788No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG3940.4318565447092093No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3890.4263761317052853No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG3680.40335839708880467No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3610.39568581888331106No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCAGCAAG3310.3628033408597672No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2900.3178639542275906No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT2890.3167678716268058No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA2860.3134796238244514No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2750.30142271521581865No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC2720.2981344674134643No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2700.2959423022118947No Hit
CATAGAAGCATGGAAGACAAACAGCACACTGACGACATGGTTCTACACAT2670.2926540544095403No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2650.2904618892079707No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2400.26305982418835083No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2290.25100291557971804No Hit
CATAGAGCAGACAAACTTGCAAAAGACTGCAGACAGGATGCGCAGATGGT2250.24661858517657892No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT2190.24004208957187015No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2170.23784992437030053No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT2050.224696933160883No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG2040.22360085056009818No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT1990.21812043755617422No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA1970.21592827235460466No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1880.20606352894754149No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAACACTGACGACATGGTATATT1870.20496744634675668No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGATGTTCCATGTGTGTGCGATGTT1800.19729486814126312No Hit
CATAGAACTCCATCATAAGTCAAAGAGCATAGCTAGTAGGTGCTAGAGGC1720.18852620733498476No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGTGTGGTTGGAGCAGAGAGAGG1550.16989280312164323No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1530.16770063792007364No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1520.16660455531928886No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACTTGTAATCCTAGC1510.16550847271850408No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1460.1600280597145801No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1440.1578358945130105No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1420.1556437293114409No Hit
CATAGAGCATTACCCTCAAACTATCCCTAAACTATCCTCTTGCCTCCGTC1360.14906723370673214No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1240.1359142424973146No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1210.1326259946949602No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATACCAGC1200.13152991209417542No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1200.13152991209417542No Hit
CATAGAAGCATGGAAGACAAACAGCATGGGCATTGCTCTTGACATCTCTA1190.13043382949339064No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1170.12824166429182104No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATTCCAGT1160.12714558169103624No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1100.12056908608632746No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACGCCTATAATTCCAGC1090.11947300348554267No Hit
CATAGACTTCAGCCCTCACAAGCCTTTATCTCCACTCTGCGGAGATGGTA1090.11947300348554267No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG1080.11837692088475786No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1070.11728083828397308No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG1030.1128965078808339No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1030.1128965078808339No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1010.11070434267926432No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGTTCTA1000.10960826007847951No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACTTGTAATCCTAGC950.10412784707455555No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACACCTGTAATCCCAGC940.10303176447377074No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCAAGC920.10083959927220117No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)