FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808165

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808165
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91234
Sequences flagged as poor quality0
Sequence length150
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3003632.92193699717211No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG47985.259004318565448No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG41534.552031041059254No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT29293.210425937698665No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG26462.9002345616765677No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGCTCTTTGACTTATGAT18221.9970624986298968No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA16961.8589560909310126No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT14901.6331630751693447No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11671.2791283951158559No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT10491.14979064822325No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT10121.1092355919942127No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG9120.9996273319157333No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG9100.9974351667141637No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG8800.9645526886906197No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA7860.861520924216849No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG7240.7935638029681916No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCCTCAACAAAGCAAACA6490.711357607909332No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT6390.7003967819014841No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA5990.6565534778700923No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTTAGGGATA5630.6170945042418396No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA4950.5425608873884735No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4890.5359843917837648No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG4520.4954293355547274No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4300.47131551833746194No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT4000.43843304031391805No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT3840.42089571870136133No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG3600.39458973628252625No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG3580.39239757108095663No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG3570.3913014884801718No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTACTCCTATGTAATGTCTTAT3330.3649955060613368No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT2880.315671789026021No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT2880.315671789026021No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2770.30361488041738827No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2660.2915579718087555No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2220.24333033737422455No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2190.24004208957187015No Hit
CATAGACCATCTGCGCATCCTGTCTGCAGTCTTTTGCAAGTTTGTCTGCT2180.23894600697108534No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA2100.23017734616480695No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG2040.22360085056009818No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG2010.22031260275774384No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT2000.21921652015695903No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTTGCTCTTT1860.2038713637459719No Hit
CATAGAACATCGCACACACATGGAACATCGCTGACTTCTCTTAAACAGTT1780.19510270293969353No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1770.19400662033890873No Hit
CATAGAAGGTGATAATCATGACAGCCAACCTTCCTGGATTCAAATCAGGC1680.18414187693184558No Hit
CATAGAAGCAGCATTGATCATCCTCCAACCCTCCCTCTCTCTGCTCCAAC1610.17646929872635203No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1570.17208496832321285No Hit
CATAGACCATCTGCGCATCCTGTCTGTCTCCTTGGGCAGCCAGGCCACCC1530.16770063792007364No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1520.16660455531928886No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1510.16550847271850408No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1460.1600280597145801No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAAGTGCTAGGATTACAAGTG1460.1600280597145801No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1420.1556437293114409No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1370.15016331630751692No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTGGGATTACAGGTG1320.14468290330359296No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTAGGGATAGTTTGAGGGTAAT1320.14468290330359296No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1290.1413946555012386No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1280.14029857290045378No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1250.1370103250980994No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1220.133722077295745No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1200.13152991209417542No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1190.13043382949339064No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1180.12933774689260583No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1180.12933774689260583No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAGAACACTGGAATTACAGGTG1170.12824166429182104No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGTTTGTCTTCCATGCTTCTA1170.12824166429182104No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAAGTGCTGCGATTACAAGCA1170.12824166429182104No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1160.12714558169103624No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT1150.12604949909025143No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1140.12495341648946666No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG1130.12385733388868185No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGGCA1130.12385733388868185No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATCTCCGCAGAGTGGAGATAA1060.11618475568318828No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1040.1139925904816187No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1030.1128965078808339No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG1000.10960826007847951No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGAATTACAGATG1000.10960826007847951No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAATTTCTGGGATTACAGGGG1000.10960826007847951No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA970.10632001227612513No Hit
CATAGACCATCTGCGCATCCTGTCTGTCCTTTCCCCATCTCCAACCCTCT960.10522392967534033No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT950.10412784707455555No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTTGACAAAGCAAACA940.10303176447377074No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA930.10193568187298595No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACGGGCA930.10193568187298595No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)