FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16541
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG862052.112931503536664No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA4552.750740584003385No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3312.0010882050661993No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC3211.9406323680551358No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC3101.8741309473429661No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG2081.257481409830119No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG2061.2453902424279064No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG1921.1607520706124177No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA1440.8705640529593132No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA1410.8524273018559942No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT1330.8040626322471436No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT1190.7194244604316548No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA970.5864216190073152No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG920.5561937005017834No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA900.5441025330995708No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC780.47155552868629463No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC750.45341877758297566No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT740.4473731938818693No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT720.4352820264796566No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG590.35668943836527417No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA530.3204159361586361No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC520.31437035245752976No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG520.31437035245752976No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG510.3083247687564234No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA500.3022791850553171No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG460.2780968502508917No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT450.2720512665497854No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG430.25996009914757273No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG420.25391451544646637No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG420.25391451544646637No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG410.24786893174535998No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCATGGTTCTACACATAGAGTGTC380.22973218064204098No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGACATGGTTCTACACATAGAGTGT380.22973218064204098No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT340.20554984583761562No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACATGGTTCTACACAT330.1995042621365093No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT330.1995042621365093No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG320.19345867843540293No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC310.1874130947342966No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT310.1874130947342966No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG300.18136751103319027No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA290.1753219273320839No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG290.1753219273320839No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG270.16323075992987124No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA260.15718517622876488No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG260.15718517622876488No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGGAGACAGCCGCTCACC260.15718517622876488No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG260.15718517622876488No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG240.1450940088265522No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA230.13904842512544585No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA220.13300284142433952No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG220.13300284142433952No Hit
CATAGAGTCCAACTATTCCAGCACCAAGTCAGGCTAATCTGAAATCTTCG210.12695725772323319No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG210.12695725772323319No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG200.12091167402212682No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACAAGGGGTAAGGCGTACTG200.12091167402212682No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT200.12091167402212682No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGGTTGATGAGACTGTGGACCA200.12091167402212682No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCCCAACTGTCTCTGAAAAATTTCT190.11486609032102049No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGCTATACCACACTACA190.11486609032102049No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA190.11486609032102049No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG180.10882050661991415No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGACGACATGGTTCTACACATAG180.10882050661991415No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG180.10882050661991415No Hit
CATAGAGCTTGGGTGCGAACATCAACACACTGACGCTATACCACACTACA180.10882050661991415No Hit
CATAGATCAAGGAAAACACCAGCCCATACGGTAGAGATCCCACCATTTGC180.10882050661991415No Hit
CATAGATCATGGGACTTCGGCATGGCGGTGTTTGCAGATTTGGACCTGCG170.10277492291880781No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG170.10277492291880781No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC170.10277492291880781No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA170.10277492291880781No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)