FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35708
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1774449.691945782457715No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG9592.685672678391397No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC6581.8427243194802285No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA6311.7671110115380306No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG6311.7671110115380306No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC5981.6746947462753445No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA4611.291027220790859No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA4581.282625742130615No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG3631.0165789178895486No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC3190.8933572308726335No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT3070.8597513162316568No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG2940.8233449087039318No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG2100.5881035062170942No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC1770.4956872409544079No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1760.4928867480676599No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCAGTTTTTCCAAATATAAGAT1660.4648818192001792No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1650.4620813263134312No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG1420.39766998991822555No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA1260.3528621037302565No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1170.3276576677495239No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1150.32205668197602777No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA1040.29125126022179904No Hit
CATAGAGAGGTCGCCCAGGTATTTCTGATTAAGTGCAGCTATATTGGAGG1000.2800492886748068No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT980.2744483029013106No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA950.26604682424106646No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG890.249243866920578No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT880.24644337403382996No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC880.24644337403382996No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA870.2436428811470819No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG860.24084238826033383No Hit
CATAGAGGTCGCAGCTACCCAGAAAGTGCCATGTCTTCTGTGTTTGGTCT850.23804189537358578No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG850.23804189537358578No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA840.2352414024868377No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG810.22683992382659346No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT800.2240394309398454No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA790.22123893805309736No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCAGGGATTATCAGTAGTGCTC760.21283745939285315No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG730.20443598073260896No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG690.19323400918561667No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA680.1904335162988686No Hit
CATAGACCATTTGCCGCGTTCTGAAGATCATTTCCCCTCTCTCTGAATAA660.18483253052537246No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGGAGGGAAGGA660.18483253052537246No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG640.17923154475187633No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC610.17083006609163212No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT600.16802957320488407No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG590.165229080318136No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG580.1624285874313879No Hit
CATAGACCCTTCTCCATGCCACATCAGCATGTTGAGATGAATAATTGAGA580.1624285874313879No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT580.1624285874313879No Hit
CATAGACTCAAGCAATCCTCCCACCTGTTCTACACATAGAGTCTCGCTAA560.15682760165789178No Hit
CATAGACCATTTGCCGCGTTCTGAAGGCTAGTCCGTCACCCCTAATCTAT560.15682760165789178No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA560.15682760165789178No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG550.15402710877114373No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA550.15402710877114373No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG540.15122661588439565No Hit
CATAGATCATGGGACTTCAGCATGGCATCACCTGAGAGCTCCGTAGACTC530.14842612299764757No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA480.13442365856390726No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTCAGTAAGTCTAAGTGCAGCTA460.1288226727904111No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT440.12322168701691498No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT430.12042119413016691No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCACATAGATTAAGTGCAGCTATAT430.12042119413016691No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG410.11482020835667077No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAGTGGACTGGTGGCTGCGCTTCT410.11482020835667077No Hit
CATAGACCCTTCTCCATGCCACATCAGGAAAGCAATCACCGCCAGTCTAT390.10921922258317464No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG370.10361823680967851No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG370.10361823680967851No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG360.10081774392293043No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC360.10081774392293043No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)