FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35708
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1803550.506889212501406No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA10422.9181135879914866No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG9512.6632687352974123No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG6831.9127366416489302No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC6421.7979164332922595No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT4581.282625742130615No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG3160.8849557522123894No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT3060.8569508233449087No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG2910.8149434300436877No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG2090.5853030133303462No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG1720.48168477652066766No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT1710.47888428363391955No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1420.39766998991822555No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA1280.35846308950375266No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1080.3024532317687913No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCAGAAATACCTGGGCG1070.29965273888204325No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA1050.2940517531085471No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA1030.288450767335051No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1000.2800492886748068No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA990.2772487957880587No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA970.27164781001456256No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA940.26324633135431835No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA910.25484485269407414No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT910.25484485269407414No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT890.249243866920578No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA880.24644337403382996No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT870.2436428811470819No Hit
CATAGACCAAACACAGAAGACATGGCACTTTCTGGGTAGCTGCGACCTCT850.23804189537358578No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA820.22964041671334154No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC810.22683992382659346No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG800.2240394309398454No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA780.21843844516634928No Hit
CATAGATGTGAGCACTACTGATAATCCCTGGGGAGACACTGGGGGCACAA760.21283745939285315No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA740.20723647361935701No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC720.20163548784586086No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTTCAGAACGCGGCAAATG700.19603450207236472No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA690.19323400918561667No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA670.18763302341212054No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC660.18483253052537246No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA640.17923154475187633No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA630.17643105186512825No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG620.1736305589783802No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC620.1736305589783802No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG620.1736305589783802No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG590.165229080318136No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTGGCATGGAGAAGG580.1624285874313879No Hit
CATAGATTAGGGGTGACGGACTAGCCTTCAGAACGCGGCAAATGGTCTAT580.1624285874313879No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA570.15962809454463986No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGCTATA570.15962809454463986No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA550.15402710877114373No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA550.15402710877114373No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG530.14842612299764757No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA500.1400246443374034No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA490.1372241514506553No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT480.13442365856390726No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAGACTTACTGACCTCTCTC460.1288226727904111No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGGCAAACACT450.12602217990366305No Hit
CATAGATACGATCATAAGGGTGGGGCATGTGATTCTGCGAGTCTACGGAG440.12322168701691498No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA420.11762070124341885No Hit
CATAGACTGGCGGTGATTGCTTTCCTGATGTGGCATGGAGAAGGGTCTAT410.11482020835667077No Hit
CATAGAGGTGAGTGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA400.1120197154699227No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA360.10081774392293043No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG360.10081774392293043No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)