FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82868
Sequences flagged as poor quality0
Sequence length150
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG67278.117729400975044No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG56596.828932760534827No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG40054.832987401650818No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA35204.247719264372255No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA28663.4585123328667278No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG22642.7320557995848818No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT22052.6608582323695518No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA21982.6524110633779023No Hit
CATAGAACACAGATCTGCTTGGAGGTAGCATAGAGTAACCTCCTCCAGTC21362.5775932808804365No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC21182.5558719891876236No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC19322.331418641695226No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCCGTGAGCCAAGT13141.5856542935753246No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT11671.4082637447506878No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG11181.3491335618091422No Hit
CATAGACTCAAGCAATCCTCCCACCTCAACCCCCCAAAATGCTAGTTTTT7270.8772988367041559No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA6780.8181686537626104No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC6730.8121349616257181No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT5350.6456050586474876No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5310.6407781049379737No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA5120.6178500748177825No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACACTGACGACATGGTTCTACACA4930.5949220446975914No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA4920.5937153062702129No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGACCATGGGTCCTTTT4890.5900950909880774No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG4870.5876816141333204No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4600.5550996765941014No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG4480.5406188154655597No Hit
CATAGAAGATGGTCTGCTACACTGGTCGTTTTATGCTTCCGAATTGTTGA4430.5345851233286673No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAGGGATTATCAGTAGTGCTCACA4000.4826953709513926No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA3740.4513201718395521No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3710.4476999565574166No Hit
CATAGATGTGCCTCTCCAACATTCATATGTTGAAACCTAGTCACCAAGGT3600.43442583385625333No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC3540.4271854032919824No Hit
CATAGAGAGGTCGCCCAGGTATTTCTACGGGGGCAGATTAACAGGTCATC3440.4151180190181976No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC3260.39339672732538494No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAATTTAATGACTGAAGCCT3140.3789158661968432No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC3010.3632282666409229No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGGAAAGCAATCACCGCCAGT3000.36202152821354444No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT2950.355987836076652No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA2870.3463339286576242No Hit
CATAGACCCTTCTCCATGCCACATCAGGGTAAAGCCAGAGCTGCTCCCCT2830.3415069749481102No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGGAGGGAAGGAAGGGCAAAC2760.33305980595646084No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATAGAGCCATGGGTCCTTTTCACA2740.3306463291017039No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT2650.3197856832552976No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC2640.3185789448279191No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG2480.2992711299898634No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT2470.29806439156248493No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCAAAATTCCTTTATCCTGG2460.2968576531351064No Hit
CATAGATCATGCAAAGAACACAGGCCCAGGAAAGCAATCACCGCCAGTCT2260.2727228845875368No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2230.26910266930540133No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAAGAATGAGGAGAGTACTA2200.2654824540232659No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA2180.26306897716850897No Hit
CATAGATCACCCAGGTAATCACTAGGTATTAAACTTAGTACCCATTAGTT2040.24617463918521024No Hit
CATAGAGGGAGGAGTGTGGACATGTCAATGTCTAGTGTGTGTGTTTGGGA2030.24496790075783176No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTTTCTTCTTCTGCAGAAATTGTGA1940.23410725491142542No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACATAAGCAAATGGGCATGT1900.22928030120191148No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA1860.22445334749239756No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTACACGAAGA1810.21841965535550514No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA1740.20997248636385576No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT1710.20635227108172033No Hit
CATAGAACCAGAGTAATGAGGGATGCTCCCCTGGAGTCAGAAATATGGAA1600.19307814838055704No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1590.19187140995317856No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT1570.1894579330984216No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT1520.18342424096152918No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG1460.17618381039725828No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1430.17256359511512284No Hit
CATAGACACCTGGATCCTGTGTTGTCTTTATTTCCTGCCTTCATTATTTT1410.17015011826036588No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG1380.16652990297823042No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1350.16290968769609498No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG1300.1568759955592026No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1230.1484288265675532No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT1210.14601534971279626No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC1210.14601534971279626No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTTCTTATAGCCAGTGTCTCCCCTC1190.1436018728580393No Hit
CNTAGAACACAGATCTGCTTGGAGGTAGCATAGAGTAACCTCCTCCAGTC1170.1411883960032823No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTGACGAATGGAGACAGCCGC1160.13998165757590383No Hit
CATAGAGAGGTCGCCCAGGTATTTCTATCATTAGAATACCTCATGTCTGC1160.13998165757590383No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC1140.13756818072114688No Hit
CNTAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA1120.13515470386638992No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCTCTCTCCAGAACCCACCAT1040.1255007964473621No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGCATGTTG1030.1242940580199836No Hit
CNTAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC1010.12188058116522664No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAATCAATGC1000.12067384273784815No Hit
CATAGATGTGGCTATGCAGACTGAGTAGACTGAGCAGAGTTGGGTGTGTC980.11826036588309119No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC950.11464015060095574No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA950.11464015060095574No Hit
CATAGACTCAAGCAATCCTCCCACCTTGGCCTCACAAAGTGCTGGGATTA920.11101993531882029No Hit
CATAGAAGGAGGGGAAACTGAGGCCACTGAGCAGAGTTGGGTGTGTCTAT920.11101993531882029No Hit
CNTAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC910.10981319689144181No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA910.10981319689144181No Hit
CATAGAGCTTCTGATCACTTTCGCCCGCCTCTCTTACATCCCTCATGATT910.10981319689144181No Hit
CATAGACCCTTCTCCATGCCACATCATAGACCCTTCTCCATGCCACACTC900.10860645846406333No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTGACGACATGGTTCTACACAT860.1037795047545494No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCAAGA850.10257276632717093No Hit
CATAGAGGGAGGAGTGTGGACATGTCCACACTCATGCAAAGCTGGTCTAT830.10015928947241395No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAAACCACTTGAACATTGCCTTTC830.10015928947241395No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)