FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114365
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2113118.476806715341233No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1175210.275871114414375No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG63725.571634678441831No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG53754.6998644690246145No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA41303.6112446989900757No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG36763.214270100118043No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT32782.866261531062825No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC31692.7709526515979537No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG30042.626677742316268No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA20441.7872600883137322No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT14281.2486337603287718No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT11621.0160451186989026No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG11310.9889389236217374No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG11030.9644559087133301No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA11000.9618327285445722No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA10390.9084947317798276No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC10060.8796397499234906No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT8550.7476063480960085No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG7600.6645389760853407No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG7250.6339352074498317No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA6940.6068290123726665No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA6920.6050802255934945No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA6400.5596117693350239No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA6300.5508678354391641No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA5930.518515280024483No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT5460.47741879071394216No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT5000.4371966947929874No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC4980.43544790801381544No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG4850.42408079394919773No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA4840.4232064005596118No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA4790.41883443361168193No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC4760.416211253442924No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGACGCTATACCA4300.37598915752196915No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC4290.37511476413238315No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT4260.37249158396362525No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG4230.3698684037948673No Hit
CATAGACCAGCAGACACTCCCATCATTCACAAGGGGTAAGGCGTACTGGT4020.35150614261356183No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGACATGGTTCTACACA3790.3313950946530844No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3720.32527434092598256No Hit
CATAGATCAAGGAAAACACCAGCCCATACGCTATACCACACTACACACTC3490.30516329296550515No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC3290.2876754251737857No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGACATGGTTCTACACA3250.2841778516154418No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG3100.2710619507716522No Hit
CATAGACCAGCAGACACTCCCATCATGCAGAAGTAGGAAGTATTACCCCT3010.2631924102653784No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGCTATACCACACTAC2870.2509509028111747No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2840.24832772264241684No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG2780.243081362304901No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT2780.243081362304901No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA2770.242206968915315No Hit
CATAGAAGGACAAAGACATTTAGGACCCACCCACAGCCAGGAAAGAATCT2670.23346303501945526No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG2620.22909106807152538No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2490.21772395400690772No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2450.2142263804485638No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2390.20898002011104796No Hit
CATAGAAATGATGCTGAAGGGCCTGCCGACATGGTTCTACACATAGAAAT2390.20898002011104796No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2370.20723123333187599No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC2290.20023608621518824No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG2180.19061775892974248No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGCTCAGGTAT2110.18449700520264067No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG2100.18362261181305467No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA2030.17750185808595287No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2000.17487867791719494No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT1950.1705067109692651No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1930.1687579241900931No Hit
CATAGAAATGATGCTGAAGGGCCTGCCTGACGACATGGTTCTACACATAG1890.1652603506317492No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1780.1556420233463035No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGACGACATGGTTCTACACATAGA1750.15301884317754558No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTCTACACATAGACCAACATTTC1740.1521444497879596No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCACAGCTGTTTCCACCCCAGAGT1650.14427490928168582No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGTCTGCCTCTAAGTAAACTG1640.14340051589209984No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC1520.13290779521706816No Hit
CATAGATCCACGTGAGAATAAAGCATACACACTGACGACATGGTCTACAC1510.1320334018274822No Hit
CATAGAAAAAACAGTTGGCCAGGCATCAGGATGGACCTGACATCTGGGTT1470.12853582826913829No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCCACGCTGTCCTTCTCTG1450.12678704148996633No Hit
CATAGAAATGATGCTGAAGGGCCTGCCACTGACGACATGGTTCTACACAT1310.11454553403576269No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATGGTTCTACACATAGAAATGAT1190.104052813360731No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT1190.104052813360731No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)