FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131148
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1839714.027663403178089No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT113948.687894592368925No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA63104.8113581602464395No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA62154.738920913776802No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG50343.838411565559521No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA39393.0034769878305423No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA23941.8254186110348614No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA23261.7735687925092263No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG21981.6759691341080307No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT18651.4220575227986703No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT17881.363345228291701No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG14491.1048586329947847No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA13221.0080214719248481No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA13201.0064964772623297No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC12370.9432091987678044No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT12280.9363467227864704No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA11200.8539970110104613No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGGTGCAAATTGTCAGTGTGTC10060.7670723152468967No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT9220.703022539421112No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT9170.6992100527648153No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8850.6748101381645164No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG8670.6610851862018483No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGGCAAACTAACACAGAAA8310.6336352822765121No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA8240.6282978009576967No Hit
CATAGAACATCTACAGAACTCTCTACCCACATAGAACAGCTAAAAATCTT8040.6130478543325099No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA7730.5894104370634703No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA7340.559673041144356No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7270.5543355598255406No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7260.5535730624942813No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTACACATAGAGAACAGCTAAAAA6860.5230731692439077No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGCTAAAAATCTTGGAGC6850.5223106719126483No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA6530.4979107573123494No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC6480.4940982706560527No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACAGAACAGCTAA6460.492573275993534No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA6360.48494830268094063No Hit
CATAGACTCTGTTTTGCTACCTGGGGCGCACAACTGGCATCTGGTGATCT6290.4796108213621252No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6030.45978589074938236No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5920.4513984201055296No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC5720.4361484734803428No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC5630.42928599749900875No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG5510.4201360295238966No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA5510.4201360295238966No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT5480.4178485375301187No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGCACAACTGGCATCTGG5470.41708604019885925No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGGCCTGTTCACTCTGA5290.40336108823619116No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG5180.3949736175923384No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT4960.37819867630463294No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT4680.3568487510293714No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA4480.34159880440418455No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACTGACGACATGTGTGAGAGGGA4460.3400738097416659No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACAGTGAAACAAGAT4440.3385488150791472No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGAGGACACTTTGGACTCTGCCTC4020.30652392716625493No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG3840.2927989752035868No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3810.2905114832098088No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT3680.28059901790343733No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA3610.27526153658462194No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAACTTAGCAACCTGTACATT3560.27144904992832525No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA3490.26611156860950985No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT3280.2500991246530637No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT3090.23561167535913627No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT3040.23179918870283953No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2920.22264922072772744No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACTACATGTGTGAGAGGGAAGGAC2910.22188672339646812No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2870.21883673407143076No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2870.21883673407143076No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2820.21502424741513404No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTAGAACA2670.20358678744624392No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2590.1974868087961692No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2540.1936743221398725No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2460.1875743434897978No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2430.18528685149601976No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA2360.1799493701772044No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2320.17689938085216703No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACTGACGACACGGACTACA2220.1692744075395736No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC2050.15631195290816483No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGTGGAGGGCTTTGCTGT1910.14563699027053406No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACGGTAGCAGATGCTCAGATCTC1810.13801201695794063No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1800.1372495196266813No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1790.13648702229542195No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1780.13572452496416262No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG1760.13419953030164394No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA1740.13267453563912526No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA1690.12886204898282858No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1680.12809955165156922No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1580.12047457833897582No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTGGAGACAGCC1530.1166620916826791No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1490.11361210235764174No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG1430.1090371183700857No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGAACAGTGAAACAAGATCGTGCC1360.10369963705127033No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1340.10217464238875165No Hit
CATAGACCACCGTGCCCAGATAAGTTTGTATTTTTGGTAGAGACAGGGTT1330.10141214505749231No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)