FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107018
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2266121.174942533031825No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA50164.6870619895718475No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA47854.471210450578408No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG42333.9554093703862905No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT28882.698611448541367No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG28592.6715132033863465No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA24262.266908370554486No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA20201.8875329383841972No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA19991.8679100712029753No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT16111.5053542394737334No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC15031.4044366368274495No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA12741.190453942327459No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA12581.1755031863798613No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA12421.1605524304322636No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG11651.0886019174344503No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT11431.0680446280065035No Hit
CATAGAAGGAGCTGGACTGGATGGACCAATAGAACAGCTAAAAATCTTGG11231.0493561830720066No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTACAGGTGCAAATTGT10991.0269300491506101No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC10931.021323515670261No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10670.997028537255415No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC9240.8634061559737614No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG9090.8493898222728887No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT8690.8120129324038947No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGAGAGGAGGGGGCAGAATATCTATG7510.7017511072903624No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7020.6559644172008448No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6950.6494234614737707No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6880.6428825057466968No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT6880.6428825057466968No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT6560.6129809938515016No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG6520.6092433048646022No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGCCTCTTGTAGAAGGGATGG5830.5447681698405876No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTGGTGGAGGGCTTT5780.5400960586069633No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTAGAACAGCTAAAAATCTTGGAGC5110.47748976807639837No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGTTGCCTTTCCTCAGTTCTT4620.4317030779868807No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT4510.42142443327290735No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA4460.4167523220392831No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA4120.38498196565063825No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGGAGAGGAGGGG4070.3803098544170139No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT4000.37376889868994No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACTGACGACATGTGTGAG3750.3504083425218188No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3580.3345231643274963No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA3400.317703563886449No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3290.30742491917247566No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3020.28219551851090474No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA3010.28126109626417983No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3000.28032667401745504No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT2970.2775234072772804No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2840.2653759180698574No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA2770.25883496234278347No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT2650.24762189538208526No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGTTCTAC2390.22332691696723916No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2390.22332691696723916No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA2390.22332691696723916No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2380.22239249472051434No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA2320.21678596124016522No Hit
CATAGATCATGGGACTTCAGCATGGCAACGAGAGTAAAACTCCGTCTCAA2290.21398269449999066No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA2210.20650731652619184No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2150.20090078304584275No Hit
CATAGATGATCCATCTACCTCTGCTTCAGGCTAAGGACGTGCAGGTCGAG1980.1850156048515203No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG1940.18127791586462091No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCATGTCTTTTGCAGGGACATGG1930.18034349361789606No Hit
CATAGAGAACAGCCCTGAGAGAATGGGTTCTACACATAGAGAACAGCTAA1870.17473696013754694No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1830.17099927115064756No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1740.1625894709301239No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1680.15698293744977482No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1640.1532452484628754No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1620.1513764039694257No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACACGGACTACAAGT1620.1513764039694257No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGAAGGGAGAGGAGGGGGCAGAATAT1550.14483544824235176No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG1460.1364256480218281No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1420.1326879590349287No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA1400.13081911454147901No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT1390.12988469229475416No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1310.12240931432095535No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1300.1214748920742305No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCAGGGAAGCCCACACTTAGAAATG1260.1177372030873311No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1250.11680278084060625No Hit
CATAGATCATGGGACTTCAGCATGGCGGTATTTGCAGATTTGGACCTGCG1200.11213066960698201No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG1180.11026182511353232No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGGAGCAGGCAAGACTGTCAAAGT1170.10932740286680746No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT1140.10652413612663292No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG1120.10465529163318321No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGTT1110.10372086938645836No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG1090.10185202489300865No Hit
CATAGATGGAAATTTTTGGCCAGGCGCTGTGGCTCACACCTATAATCCCA1080.10091760264628381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)