FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107018
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2303621.525350875553645No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT49374.613242632080585No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA48914.570259208731241No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG43074.024556616643929No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT28222.636939580257527No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG28182.633201891270627No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA23842.2276626361920426No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA20661.9305163617335401No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA20561.9211721392662917No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT15411.4399446822029938No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT15231.4231250817619465No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT12971.2119456540021305No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA12931.208207965015231No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT12601.177372030873311No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT11841.1063559401222225No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTGGTCCATCCAGTCCAGCT11521.0764544282270272No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11101.0372086938645835No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10851.0138481376964623No Hit
CATAGACACACTGACAATTTGCACCTGTAGACTCTGTTTACTCGGAGATT10851.0138481376964623No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC10811.010110448709563No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA9330.8718159561942851No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT8790.8213571548711431No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG8730.815750621390794No Hit
CATAGATATTCTGCCCCCTCCTCTCCTTCCACTACCCACCTGCCTCTATG7810.7297837746921079No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7360.6877347735894896No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7220.6746528621353417No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7210.6737184398886169No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC6970.6512923059672205No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT6600.616718682838401No Hit
CATAGACCATCCCTTCTACAAGAGGCACATAGGAGGAGCTGACTTACTGT5740.536358369620064No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTTTTCTGTTTACTCGGAGATTT5520.5158010801921172No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAAGGAGGAGCTGACTTACTGT5090.4756209235829487No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGATAGCGAGAAGAGTGGAG4680.43730961146722985No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC4520.42235885551963226No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA4290.40086714384496064No Hit
CATAGATATTCTGCCCCCTCCTCTCCCATAGACTCTGTTTACTCGGAGAT4240.39619503261133643No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT4240.39619503261133643No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT3970.37096563194976545No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGGAGGAGAATGATATT3770.3522771870152685No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3530.3298510530938721No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3450.32237567512007326No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA3190.29808069670522713No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3120.2915397409781532No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT3050.28499878525107925No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2850.2663103403165823No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2780.2597693845895083No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2770.25883496234278347No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCAGGGCAGAG2690.25135958436898465No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2660.2485563176288101No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG2630.24575305088863555No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2460.22986787269431308No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT2400.22426133921396402No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA2370.22145807247378946No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA2370.22145807247378946No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2270.21211385000654095No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA2210.20650731652619184No Hit
CATAGAAGTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAACAT2180.2037040497860173No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2060.19249098282531912No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2060.19249098282531912No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2050.19155656057859427No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCCATTCTC1920.1794090713711712No Hit
CATAGATATTCTGCCCCCTCCTCTCCACCAGGAAAGCTAAGAGTCTCGAC1810.16913042665719785No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1790.16726158216374815No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1740.1625894709301239No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1670.15604851520304996No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1650.15417967070960026No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTAGCTTACACT1630.15231082621615055No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1600.14950755947597602No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTTCCTTCCACTACCCACCTGCCT1590.14857313722925117No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1520.1420321815021772No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1510.14109775925545237No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT1330.12427815881440504No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1310.12240931432095535No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1210.11306509185370685No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1170.10932740286680746No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGCCCGGCTTCCTTGGGACA1170.10932740286680746No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG1130.10558971387990806No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA1120.10465529163318321No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATACGGCAACATATCAGAAG1110.10372086938645836No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCCCCCACTCCGGAGTCTCATTC1080.10091760264628381No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1080.10091760264628381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)